| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3070 |
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| Symbol | |
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| ID | 7088980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3637449 |
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| End bp | 3638099 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643461954 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002358978 |
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| Protein GI | 217974227 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000689776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000283062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGATATGC AAAACAACAT CATCAGTGTC GGCTTAGTAG AAGATCAACA ATTGGTTCGT
CAAGGTATCG CTAGCCTGCT CGCCATTTCC GACAACATTC GCGTGGTGTG GCAGGCCGAA
GACGGCCAAG ATGCACTCAG CCAACTCGCT AATAATCCTG TCGATGTGCT GCTCAGTGAT
ATTCGCATGC CAAATCTTGA TGGCATCGCC ATGCTCAAAC AGATACGTCA GAGTGCCAAT
AGCTTACCTG TCATCATGTT AACCACCTTC GATGACAGTG AGTTATTCCT CAATAGTTTA
CAGGCGGGCG CCAACGGCTT TTTGCTCAAG GACGTGTCAC TCGATAAGTT ACTGCACGCC
ATCGAAACCG TCGCCAAAGG CGGCTACTTG ATTGAACCTT CGGTACTCAA ACAGATGAGT
GAGCCTAAAC CTGCACCTAA CGTTGGGGTA ACTAGAAATG AATTATTGTC GGAACGGGAG
CGGGAAATCC TCAGTTTTAT GGCGGGCGGG TTCTCCAACA AGGAAATCGC CAATGCGGTA
TTTCTAGCCG AGGGCACAGT GAAAAATCAT GTCTCTAACA TACTCACTAA ACTCGATTGC
CGAGACCGCA CCCAAGCTGT ACTCAAGGGC TTACAACTGG CATTAATCTA A
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| Protein sequence | MDMQNNIISV GLVEDQQLVR QGIASLLAIS DNIRVVWQAE DGQDALSQLA NNPVDVLLSD
IRMPNLDGIA MLKQIRQSAN SLPVIMLTTF DDSELFLNSL QAGANGFLLK DVSLDKLLHA
IETVAKGGYL IEPSVLKQMS EPKPAPNVGV TRNELLSERE REILSFMAGG FSNKEIANAV
FLAEGTVKNH VSNILTKLDC RDRTQAVLKG LQLALI
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