| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3028 |
|---|
| Symbol | |
|---|
| ID | 7088937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3584081 |
|---|
| End bp | 3586312 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643461912 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_002358936 |
|---|
| Protein GI | 217974185 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.938358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTC AAGCCAATGC CTATTTTTAC GATGGCGCCG ACGTCGCCCT ACTTAATGGT
CAATACACTG ATGTTTTTTC GCTCTTGGGT ATGCACAGTG CCAATGAGGG TAAGGCATTA
ATTGTTCGTT GTTTTTTACG CAATGCCCTC AGTGTGGATG TGATCAGCAT TAAAGATGGC
CGCAAAGTAG CGAGTCTGGA CAAAGTTAAC GAGCAGGGAT TGTTCGCCGG TACGCTGGGG
CGACGCGTCA AACCGTTTCT CTATTTGCTG CGGGTAGAAT ACCCCCAGTG TCAGCTAGAT
ATAGTCGACC CTTATCAGTT TGATTCACTG CTCAATAGTG ACGATATTTA CCTGTTTGGT
GAAGGCAGCG CCGAGCGCGC CTATGAGTTT TTAGGCGCCA ACTGGCGTCA GACCCAAGGC
GTTGAAGGTG TGCATTTTTG TGTGTGGGCA CCCAATGCCA AACGGGTTTC TGTGGTGGGG
GATTTCAACC ATTGGGACGA TACTCGCCAT GTAATGCGCC AACATCTTGC CAATGGTTTG
TGGGAGCTAT TTCTGCCTAA TGTGGTTGAA GGCGCCCACT ATAAGTTTGA TTTGGTTTAT
CAAAATGGTG AGCGTCATGC CAAGTCCGAC CCCATGGCGA CTCAAATGGA ATGCGCGCCC
CATAATGCTT CTATCGTGCC CCCAAAAGCC CATCACAGTT GGAATGATAC CGCTTGGATG
AGTAAACGCG CGGCGACAGC TTGGCATAAA GCGCCCATGT CGGCCTACGA AGTGCACTTA
GGTTCGTGGC GTCGTAAGGG AGAGCAAGGT GAGCAATATC TTGATTATCA AGACTTGATT
GAACAGCTTA TTCCCTATGT GAAGGAGCAA GGTTTTACCC ACATTGAACT GATGCCGATC
AGCGAGTTTC CCTTCGATGG TTCGTGGGGA TATCAGCCTG TGGGTCTCTA TGCACCGACC
CACAGATTTG GCGATGCCAA TGGGTTAAAA GCCTTTGTGG ATGCCTGCCA TCAGGCGGGA
ATTGGTATCA TCCTCGATTG GGTGTCGGCG CATTTTCCTA AGGATCCCCA CGGCTTAGTG
CGTTTCGATG GCACTTGTTT GTATGAGCAC GAAGATCCTC GCAAGGGCAC ACATCCCGAT
TGGGATACCC TGATTTATAA CTATGATCGC GGTGAAGTGC GCAGTTTCTT GTTGAGTAAT
GCCTGTTACT GGCTGCGGGA GTTTCATTTT GATGGCCTGC GTCTCGATGC CGTCTCTTCT
ATGTTGTACC TCGATTACAG CCGCGAGCCG GGCCAATGGC TGCCCAATAC CTATGGTGGA
CGGGAGAATC TCGAAGCCAT TAATTTCTTA CAAATTTTGA ATCAACGCCT GTACCAAGCG
TTCCCCGGCA TTTGCATGAT TGCCGAAGAG TCCACCGCCT TTGCGGGGGT GACTAAACCG
ACGGATCAGC AAGGTCTCGG CTTTGGCTTT AAATGGAATA TGGGCTGGAT GAACGACAGC
TTAAGCTACT TAGGCCGAGA TCCGCTTTAC CGCCAATTCC ACCATCATCA ATTGACCTTC
AGTTTGATGT ACGCCTATAC CGAGCAATTT ATGTTGTCCG TGAGTCACGA TGAAGTGGTC
CACGGCAAGG GCTCGTTGCT GCATAAAATT CCCGGTGATG ATTGGCAGAA ATTTGCGACC
CTGCGTGCTT ATTACGGTTT TATGTGGGGG CACCCAGGCA AAAAATTACT CTTTATGGGC
TGCGAGTTTG GTCAGCGAAA TGAGTGGAAT CATAACCAGA GTTTAGATTG GCACTTATTG
GCCTATGAAC CGCACCAAGG TGTGCAACGT TGGCTTAAAG ATCTCAATCA CTTGTATCAA
GCCATGCCTG CTTTATCGGT TCAGGATTAC GAGGGGGCAG GATTCAGTTG GCTAGATTGT
GAAAATAGCC GCGACAGCAT CTTTACCTTT GTGCGTTACG GGTTAGCGGG TGATGCGCCG
TTAGTGTTTG TCATCAACAT GACGCCCCAA TTGCACACTG GGTTCCGTAT TGGTTTGCCT
TTGGCGGGGG ATTACCGCGA ATACCTGAAT AGCGATAGCC AGATTTATGG TGGCAGTAAC
CAAGGTAATG CGGGCACTGT CGTTGCTGAG TCGCTGCCGT GGCAGGGCAT GGCGCAGAGC
GCGCTGATCA CTGTGCCGCC CTTGGGTTGC CTAGTGATAG GGCCTGCAAC TGGATTGGCT
GAGGCGAACT AG
|
|---|
| Protein sequence | MMTQANAYFY DGADVALLNG QYTDVFSLLG MHSANEGKAL IVRCFLRNAL SVDVISIKDG
RKVASLDKVN EQGLFAGTLG RRVKPFLYLL RVEYPQCQLD IVDPYQFDSL LNSDDIYLFG
EGSAERAYEF LGANWRQTQG VEGVHFCVWA PNAKRVSVVG DFNHWDDTRH VMRQHLANGL
WELFLPNVVE GAHYKFDLVY QNGERHAKSD PMATQMECAP HNASIVPPKA HHSWNDTAWM
SKRAATAWHK APMSAYEVHL GSWRRKGEQG EQYLDYQDLI EQLIPYVKEQ GFTHIELMPI
SEFPFDGSWG YQPVGLYAPT HRFGDANGLK AFVDACHQAG IGIILDWVSA HFPKDPHGLV
RFDGTCLYEH EDPRKGTHPD WDTLIYNYDR GEVRSFLLSN ACYWLREFHF DGLRLDAVSS
MLYLDYSREP GQWLPNTYGG RENLEAINFL QILNQRLYQA FPGICMIAEE STAFAGVTKP
TDQQGLGFGF KWNMGWMNDS LSYLGRDPLY RQFHHHQLTF SLMYAYTEQF MLSVSHDEVV
HGKGSLLHKI PGDDWQKFAT LRAYYGFMWG HPGKKLLFMG CEFGQRNEWN HNQSLDWHLL
AYEPHQGVQR WLKDLNHLYQ AMPALSVQDY EGAGFSWLDC ENSRDSIFTF VRYGLAGDAP
LVFVINMTPQ LHTGFRIGLP LAGDYREYLN SDSQIYGGSN QGNAGTVVAE SLPWQGMAQS
ALITVPPLGC LVIGPATGLA EAN
|
|---|
| |