Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3024 |
Symbol | glgC |
ID | 7088933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3577889 |
End bp | 3579151 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461908 |
Product | glucose-1-phosphate adenylyltransferase |
Protein accession | YP_002358932 |
Protein GI | 217974181 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.823168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTAATG TTCGTTATAT CAGTAATTTA ACTCGTGAAA CCTATGCGTT GATTTTAGCT GGTGGGCGCG GGTCTCGCTT GCATGAACTC ACGGATTGGC GTGCTAAACC GGCGCTGTAT TTCGGTGGTA AGTTTCGTAT TATCGATTTT CCGCTGTCTA ACTGCATCAA CTCAGGTATT CGCCGCGTGG GTGTGGTCAC TCAGTACAAG TCGCATTCCT TGATCCGCCA TGTAATGCGC GGTTGGGGCC ATTTTAAGAA AGAGTTAGGC GAGTCGGTGG AGATTTTACC CGCCTCACAA CGCTATTCGG AAAACTGGTA TCAAGGCACG GCCGATGCGG TATTCCAAAA CATCGACATC ATTCGCCACG AGTTACCTAA GTATGTGATG GTGCTGTCGG GCGATCACGT GTATCGCATG GATTATGCGG GGTTATTAGC CGCCCATGCC GAGTCGGGCG CAGATATGAC AGTCTCATGC CTTGAAGTGC CGATTGCCGA AGCGGCGGGT TCGTTTGGGG TGATGGAAGT CGACGAAGAG ATGCGCATTT TAGGCTTTGA AGAAAAGCCG CAGCAGCCTA AACATTCTCC GGGTAATCCA GAAATGTGTT TAGCGTCTAT GGGCAACTAT GTGTTTAACA CAGAGTTTTT GTTTGACCAG CTCAAGAAAG ATGCACTAAA TGAAAGCTCA GATCGGGATT TTGGTAAGGA TATTATTCCT GCTATCATCG AAAAACATAA TGTGTTTGCC TATCCCTTTA AGAGCGCTTT CCCGAACGAG CAAGCCTATT GGCGCGATGT GGGGACGTTA GACTCTTTCT GGCAAGCGAA TATGGAGCTG TTATCGCCCA CGCCAGCATT GAATTTGTAC GATGCAAAAT GGCCAATTTG GACCTTCCAA GAACAATTGC CACCCGCTAA ATTTGTGTTT GATGACGATG ATAGACGCGG TATGGCGCTG GACTCGATTG TCTCGGGCGG TTGTATTATT TCGGGTGCGA CAGTGCGCCG TAGCGTATTG TTTAACGAAG TACGTGTCTG TTCTTATTCG TTGGTTGAAG ATTCTGTGGT GCTACCCGAT GTGGTCGTGC TGCGCCATTG CAAAATCAAG AATGCCATAC TCGACCGTGG CTGCATTATT CCCGAAGGCA TGGTGATAGG TTATAACCAC GATCACGACC GAGCCAAAGG CTTTAGAGTG TCGGAAAAAG GCGTCACCTT AGTGACCCGT GACATGCTAG GTTTACCAGT GGGTTATGAA TAA
|
Protein sequence | MSNVRYISNL TRETYALILA GGRGSRLHEL TDWRAKPALY FGGKFRIIDF PLSNCINSGI RRVGVVTQYK SHSLIRHVMR GWGHFKKELG ESVEILPASQ RYSENWYQGT ADAVFQNIDI IRHELPKYVM VLSGDHVYRM DYAGLLAAHA ESGADMTVSC LEVPIAEAAG SFGVMEVDEE MRILGFEEKP QQPKHSPGNP EMCLASMGNY VFNTEFLFDQ LKKDALNESS DRDFGKDIIP AIIEKHNVFA YPFKSAFPNE QAYWRDVGTL DSFWQANMEL LSPTPALNLY DAKWPIWTFQ EQLPPAKFVF DDDDRRGMAL DSIVSGGCII SGATVRRSVL FNEVRVCSYS LVEDSVVLPD VVVLRHCKIK NAILDRGCII PEGMVIGYNH DHDRAKGFRV SEKGVTLVTR DMLGLPVGYE
|
| |