| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2957 |
|---|
| Symbol | |
|---|
| ID | 7089025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3486103 |
|---|
| End bp | 3488322 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643461842 |
|---|
| Product | TonB-dependent heme/hemoglobin receptor family protein |
|---|
| Protein accession | YP_002358866 |
|---|
| Protein GI | 217974115 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.910627 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTGCC TGCCTAAATT TTGGAAATGG AAAGCGAATA GAAATCTGTC GCTGATGGGA
TTATGTTTGT TGCCCTCAAT GCCGTTGTAC GCAAATGAGG TATTGGGCGA GCCTAAGGTT
GAGCCGATTG AAATCCTGCA GGTTCATGGG CAGCAATATC GTAGGGCCAT CACAGTCGCT
AAACCTGGTG AAGCGATTAT TTCCATGGAA CAAATCGAGG AGATGCAGGC GACGACCTTC
GCCGAAGTGA TTGATGATAT GGCGGGGGCC CATATCGATG GTGGCACCCG CAGCGGCGGT
GAGCGGATTA ATATCTGGGG CTTTGGCGAG ACCGAAGATT TTAACGTTTA TGTGGATAAT
GCTCCGGTGG GATTTGAGCA GTATCGCTAT GGCTCATTTT TCCTCGATCC TGATCTCATC
AAACGAGTGG AAGTGATCAA AGGTGCCCAT GACGTGCGCT CGGGCAATGG CGGTTTTGGT
GGGGCCATGT ATGTGGTCAC TAAATCGGCC GATGATTTTC TTAAATACGA TCAAGCGATT
GGCGCGCGAG TTAAAACCAG CTACGCCAGT AATAATGACG CTGTGGGTTA TACGGGAACT
GTCTATGGCA GGGTGAATTC ACATTTATCG GGGTTGTTGC ACCTTACACG CCGTGATGCG
GGGGATGTGA CTTTAGCCAA TGGCGATGAG TTTGAATATT CGGGCTATGG GCAAGATAAC
TACCTAGGCA AGATTGATTA TGAGCAGGGC GATCACCAAC TGGCCTTGAG CGTGACCCAT
TATCTCGATG AGGGCCGCAA ACCTTGGGCT AATCGCCGTG GCCCCATGCC TGCCATCTCA
GACTACAACA TCAAAAAGTA CGGCTCCTAC GAGCAGGCGC TGTATGCCAC AACCGCCTAT
AACACCTATG AAGACAACAC TTGGTCTGCC AATTATCGTT ATTCGCCGAG CAATCCGCTG
ATTGATACCC AAGTGGTGAT CTCCCATTCG GCGAATGCGC GCCACTGGGT AAGACCCGAT
ATCGCGTGGG AGAAAATGAC GGTTTCCGTA GGCAACTTCG GCCACGAATC TTGGCTAGAT
TACAAACGTG AATATATTGA TATCAACAAC TTGAGTTTGA TTGGCGATCA CGAGATCACC
ACAGGATTGC AGTACCGCAG TCTCGACCGT ACTTCGCTCG TGTTTAACAA GAGCTATGAG
AAGAATCCTG AGAAAAACTT TGGCTGGTAC ACACCTTATT ATCAACCTGA AGGTCGCCAA
GACACCTATG CCGTGTATGT TCGCGATGCG ATTCATCTCA CCAACGACTT AACCGTCACT
CCCTCGCTGC GATATGACTT TATCTACAGC ATAGGTCGGC CAAATATTGC GCCAGATTAT
AACGACATCA GCGCGGGTCA CGATTATAGC TCGACTCACC ACTCGGGGTT TTCACCAAGA
TTAGGCATAG ATTATCAACT GACAAACTAC GCTCGGTTAA ACTTTGATTA CGCCTATAGC
TTGCAAGCCC CTGTGGTGGA TGAGATTTAT GCCGTGCAAT ACGTCAAAGC CAGCATTACC
GGCACGAGTC GCGACATCGA TGTCGAACGC TTACATGCCT TCAAGCTAGG CTTGATGACA
CAGCACCAGC ATCTGCTTGC CAACGATGAT GCGCTGTCGA CGCAGCTCAC TCTGTTTGCC
AACCTAGGCC GCGATGATAT CGCCCAGCGC CGTGGGGCTA AGTCTGATAA AACCCAGTTA
ATTCAAAGTG GGTATACCAA TCTTGATGGC TACCATATTT ACGGTGCTGA TTTTGAGGCC
CAATATCGCT ATCAAGACGT GTTCAGTGAT CTGGCGGTTT CATGGCTGCA AGGACAACAC
AATGGGTCAC TCAGAGACAG CCAAGATGAC GACGAGTATT TAGCCAACAT GGCGCCGCTC
GATATTCGTC TGCGTTTAGG CATGTATATT ACCGATGATA TTTCAGTGGC TTGGCAGGGC
GCTTGGTATG ATGCGCAAAC CAGTGTTCCC CATGGCGATA TCTTTAATGC CGAGTCGCCG
AGCGAAAATT ACTTCTTGCA GAACCTGTAC CTCGCCTATG AGCCCCAAGC TGGTTTAAAG
GGATTAAGCG TGCGTTTGAT GGTGAAAAAC CTCACCAATC TGCAAGTGGT GCCGTTTCTC
TCCGATGGGA TCCCAGCTGC TGGGCGCGAT GTTCGCTTGA GTTTAGCTTA TGAATTTTAA
|
|---|
| Protein sequence | MGCLPKFWKW KANRNLSLMG LCLLPSMPLY ANEVLGEPKV EPIEILQVHG QQYRRAITVA
KPGEAIISME QIEEMQATTF AEVIDDMAGA HIDGGTRSGG ERINIWGFGE TEDFNVYVDN
APVGFEQYRY GSFFLDPDLI KRVEVIKGAH DVRSGNGGFG GAMYVVTKSA DDFLKYDQAI
GARVKTSYAS NNDAVGYTGT VYGRVNSHLS GLLHLTRRDA GDVTLANGDE FEYSGYGQDN
YLGKIDYEQG DHQLALSVTH YLDEGRKPWA NRRGPMPAIS DYNIKKYGSY EQALYATTAY
NTYEDNTWSA NYRYSPSNPL IDTQVVISHS ANARHWVRPD IAWEKMTVSV GNFGHESWLD
YKREYIDINN LSLIGDHEIT TGLQYRSLDR TSLVFNKSYE KNPEKNFGWY TPYYQPEGRQ
DTYAVYVRDA IHLTNDLTVT PSLRYDFIYS IGRPNIAPDY NDISAGHDYS STHHSGFSPR
LGIDYQLTNY ARLNFDYAYS LQAPVVDEIY AVQYVKASIT GTSRDIDVER LHAFKLGLMT
QHQHLLANDD ALSTQLTLFA NLGRDDIAQR RGAKSDKTQL IQSGYTNLDG YHIYGADFEA
QYRYQDVFSD LAVSWLQGQH NGSLRDSQDD DEYLANMAPL DIRLRLGMYI TDDISVAWQG
AWYDAQTSVP HGDIFNAESP SENYFLQNLY LAYEPQAGLK GLSVRLMVKN LTNLQVVPFL
SDGIPAAGRD VRLSLAYEF
|
|---|
| |