| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2901 |
|---|
| Symbol | tsf |
|---|
| ID | 7089470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3410304 |
|---|
| End bp | 3411155 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643461786 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_002358810 |
|---|
| Protein GI | 217974059 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000344412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.175279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTA CTGCTGCCCA AGTTAAAGAA CTGCGCGACC GTACTGGCGC AGGCATGATG
GATTGTAAAA ACGCTCTGAC AGAAACTAAC GGCGACATGG AGTTAGCAAT TGACAACATG
CGTAAGTCTG GTGCTGCTAA AGCTGCTAAA AAAGCGGGTA ACATCGCTGC TGACGGTACA
ATTCTGATCA AGAATGGCGA AGGTTTCGCT GCGCTGTTAG AAGTTAACTG TCAAACTGAC
TTCGTTGCTA AAGATTCAAA CTTCTTAGCA TTCGCGAACG CAGTATTAGA TGCCGCTGCT
GCATCTAAAG TGACGCTTGA AGATTTAAAA GCACAGTTCG AAGACGCACG TGTTGCGTTA
GTAACTAAAA TCGGTGAAAA CATCAACATT CGTCGTGTTG AGTACATCGA TGGTGCAAAC
CTATCTTCAT ACCGTCACGG TGAGCGCATT GGTGTTGTTG TAGCCGGTGA AGCTGACGAA
GAAACCTTAA AGCACATCGC AATGCACGTT GCTGCTTCTA AGCCTGAATA CGTGAACCCA
GAAGATGTTC CTGCAGAAAT CGTTGCAAGA GAACAAGCTC TGCAAATTGA AATGTCTATG
AACGAAGGCA AATCGGCAGA GATCGCTGAG AAGATGGTTC TTGGTCGTAT GAAGAAGTTC
ACCGGTGAGA TTTCTCTGAC TGGTCAAGCT TACATCATGG AACCAAAGAA AACTGTTGGC
GAAATTCTGA AAGAGAAAGG CGCTAAAGTC ACTAACTTCA TTCGTTTAGA AGTGGGTGAA
GGTATTGAGA AGAAAGAGGA AGATTTCGCA GCTGAAGTTG CTGCTCAAAT CGCTGCTTCT
AAAAAGGCTT AA
|
|---|
| Protein sequence | MAITAAQVKE LRDRTGAGMM DCKNALTETN GDMELAIDNM RKSGAAKAAK KAGNIAADGT
ILIKNGEGFA ALLEVNCQTD FVAKDSNFLA FANAVLDAAA ASKVTLEDLK AQFEDARVAL
VTKIGENINI RRVEYIDGAN LSSYRHGERI GVVVAGEADE ETLKHIAMHV AASKPEYVNP
EDVPAEIVAR EQALQIEMSM NEGKSAEIAE KMVLGRMKKF TGEISLTGQA YIMEPKKTVG
EILKEKGAKV TNFIRLEVGE GIEKKEEDFA AEVAAQIAAS KKA
|
|---|
| |