Gene Sbal223_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2901 
Symboltsf 
ID7089470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3410304 
End bp3411155 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID643461786 
Productelongation factor Ts 
Protein accessionYP_002358810 
Protein GI217974059 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.44412e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.175279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA CTGCTGCCCA AGTTAAAGAA CTGCGCGACC GTACTGGCGC AGGCATGATG 
GATTGTAAAA ACGCTCTGAC AGAAACTAAC GGCGACATGG AGTTAGCAAT TGACAACATG
CGTAAGTCTG GTGCTGCTAA AGCTGCTAAA AAAGCGGGTA ACATCGCTGC TGACGGTACA
ATTCTGATCA AGAATGGCGA AGGTTTCGCT GCGCTGTTAG AAGTTAACTG TCAAACTGAC
TTCGTTGCTA AAGATTCAAA CTTCTTAGCA TTCGCGAACG CAGTATTAGA TGCCGCTGCT
GCATCTAAAG TGACGCTTGA AGATTTAAAA GCACAGTTCG AAGACGCACG TGTTGCGTTA
GTAACTAAAA TCGGTGAAAA CATCAACATT CGTCGTGTTG AGTACATCGA TGGTGCAAAC
CTATCTTCAT ACCGTCACGG TGAGCGCATT GGTGTTGTTG TAGCCGGTGA AGCTGACGAA
GAAACCTTAA AGCACATCGC AATGCACGTT GCTGCTTCTA AGCCTGAATA CGTGAACCCA
GAAGATGTTC CTGCAGAAAT CGTTGCAAGA GAACAAGCTC TGCAAATTGA AATGTCTATG
AACGAAGGCA AATCGGCAGA GATCGCTGAG AAGATGGTTC TTGGTCGTAT GAAGAAGTTC
ACCGGTGAGA TTTCTCTGAC TGGTCAAGCT TACATCATGG AACCAAAGAA AACTGTTGGC
GAAATTCTGA AAGAGAAAGG CGCTAAAGTC ACTAACTTCA TTCGTTTAGA AGTGGGTGAA
GGTATTGAGA AGAAAGAGGA AGATTTCGCA GCTGAAGTTG CTGCTCAAAT CGCTGCTTCT
AAAAAGGCTT AA
 
Protein sequence
MAITAAQVKE LRDRTGAGMM DCKNALTETN GDMELAIDNM RKSGAAKAAK KAGNIAADGT 
ILIKNGEGFA ALLEVNCQTD FVAKDSNFLA FANAVLDAAA ASKVTLEDLK AQFEDARVAL
VTKIGENINI RRVEYIDGAN LSSYRHGERI GVVVAGEADE ETLKHIAMHV AASKPEYVNP
EDVPAEIVAR EQALQIEMSM NEGKSAEIAE KMVLGRMKKF TGEISLTGQA YIMEPKKTVG
EILKEKGAKV TNFIRLEVGE GIEKKEEDFA AEVAAQIAAS KKA