Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2765 |
Symbol | |
ID | 7087144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3249648 |
End bp | 3251600 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461652 |
Product | decaheme cytochrome c |
Protein accession | YP_002358676 |
Protein GI | 217973925 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00105295 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000731399 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGAACG CACAAACAAC TAAAATCGCA CTGCTGTTAG CAGCAAGTGC AGTCACTATG GCCTTAACTG GCTGTGGTGG CAGCGATGGT AATGATGGTA ATCCCGGTGA ACCTGGTGGC GAACCTGCTC CAGCGATTCA AACCCTTAAT TTCACGTTTG ATAAATCTGT CGTCACTAAC GGTGTACCGA GTGTTGAGTT TACCGTGACT AACGAAGATG ATTTACCCGT CGTTGGTCTC CAAAAAATGC GCTTCGCCGC AGCACAGTTG ATCCCACAAG GTGCTACAGG TGCCGGTAAT GCCTCACAAT GGCAATACTT TGGTGATGAA ACCTGCGATG TCGCAGCAAC ATGCCCAGGG ACTTTTATTG ACCAGAAAAA CGGTCACTAC AGTTATACCT TCAACATGAA CCTGACCGCT AACGCTAAAA TCACCTACAA CGATCAGTTA GCTCAACGGG TGTTAATCCG CGCTTATAAC ACGCCGTTAC CCGATGGTAC TCAAGTCCCT AACAGTAACG CCTTTGTCGA CTTTACGGCC GATACCGGTG CTGCACCGAC ATACAGCCGC AAAATTGTTG CCACTGAAAG CTGTAATACC TGTCACCAAG ATTTAGCCAA TGTGAAACAC GGCGGCGCGT ACTCAGATGT TAACTACTGT GCAACTTGCC ACACAGCAGG CAAAGTTGGC GTAGGTAAAG AGTTCAATGT TCTCGTTCAC GCTAAACACA AAGACCTGAC CTTAGGTTCA TTGGAAAGCT GCCAAAGCTG TCATGCTGCA AACGATGTCG CGCCAGATTG GGGTAATTGG TCACGTATTC CAACTGCCGC TACCTGTGGA AGCTGTCATA GCACAGTGGA CTTCGCCGCA GGTAAAGGCC ATTCACAACA GCTAGATAAC TCAAACTGTA TCGCCTGTCA TAACAGCGAC TGGACTGCCG AGCTACACAC AGGCAAGACT GCTGACAAGA AAGCCGTTAT CGCTCAGTTA GGTATGCAAG CGACTCTCGT GGGTCAAACT GATGATACTG CGGTATTAAC TGTCTCTATC TTAGACAAAG ACGGTAACGC GATTGATGCG GCAACGGTTC AAGACAAGAT TAAACGTTTA GAAACTGTCA CTAACGTTGG CCCTAACTTC CCAATTATGG GTTACAACAA GAGCCCTGGT AGTGGTGCTG CGAAAATTGC TAAAGACTTA GTCAAAGATG GCGCACTGCA AGATGGCGTG ACCTTAGTTG ACGGCAAACT GGTTTTCACT ACACCTGCCC TGCCTTTCGG TGCTGGCGAT ACAGATACGG CCTTTACTTT TATCGGTCTG GAAATGTGTA GCACAGGTAC TAGCTTAACG GCATGTACCG TTGATAGCGC AACCACCAGT ATGAAAGCAG AGCTCGCCTT TGGTACTAAA TCAGGTAATG CCCCAAGCAT GCGCCATGTT AACTCAGTTA ACTTCAGCAC CTGTCAAGGC TGTCACAGCG ATACCTTTGA AATCCACAAA GGCCACCATT CAGGTTTTGT GATGACAGAG CAAGTATCAC ACGCAAAAGA TGCGAACGGT AAAGCGATCG TCGGTGTTGA TGGTTGTGTC GCGTGTCATA CACCTGATGG TACTTATGCT TCTGGTGCTA ACAAAGGCGC ATTCGAGATG AAACTGCACG TGATCCACGG CGAGCAAGGT GTCATCAAAG AATGTACCCA ATGTCACAAC GATTTCAACT TAGATGCATT CAAAGTGAAA GGCGCGCTGG CAACATCAGC AGGTAAATAC ACCACGCCAA TCACAGCCAC TTGTACTTCA TGCCACGCGC CAGAATCCAT TGGCCACGGC TTAGAAAACA TGGGCGCGAT TGTGAACGGT GATTATGTTC AAGCTAACCA AGCGGCGCAG TCAGAAACCT GTTTCTACTG TCACAAACCC ACACCAACAG ATCACACTCA GGTGAAAATG TAA
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Protein sequence | MMNAQTTKIA LLLAASAVTM ALTGCGGSDG NDGNPGEPGG EPAPAIQTLN FTFDKSVVTN GVPSVEFTVT NEDDLPVVGL QKMRFAAAQL IPQGATGAGN ASQWQYFGDE TCDVAATCPG TFIDQKNGHY SYTFNMNLTA NAKITYNDQL AQRVLIRAYN TPLPDGTQVP NSNAFVDFTA DTGAAPTYSR KIVATESCNT CHQDLANVKH GGAYSDVNYC ATCHTAGKVG VGKEFNVLVH AKHKDLTLGS LESCQSCHAA NDVAPDWGNW SRIPTAATCG SCHSTVDFAA GKGHSQQLDN SNCIACHNSD WTAELHTGKT ADKKAVIAQL GMQATLVGQT DDTAVLTVSI LDKDGNAIDA ATVQDKIKRL ETVTNVGPNF PIMGYNKSPG SGAAKIAKDL VKDGALQDGV TLVDGKLVFT TPALPFGAGD TDTAFTFIGL EMCSTGTSLT ACTVDSATTS MKAELAFGTK SGNAPSMRHV NSVNFSTCQG CHSDTFEIHK GHHSGFVMTE QVSHAKDANG KAIVGVDGCV ACHTPDGTYA SGANKGAFEM KLHVIHGEQG VIKECTQCHN DFNLDAFKVK GALATSAGKY TTPITATCTS CHAPESIGHG LENMGAIVNG DYVQANQAAQ SETCFYCHKP TPTDHTQVKM
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