| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2723 |
|---|
| Symbol | |
|---|
| ID | 7087102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3196540 |
|---|
| End bp | 3197751 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643461610 |
|---|
| Product | porin Gram-negative type |
|---|
| Protein accession | YP_002358634 |
|---|
| Protein GI | 217973883 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000866519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000818773 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA CGTTAGTAGC AACTGCGCTT GCAGCAATTT TTTTAGTACC ATCAGTCTCG
GCTATCGAGA TCTATAAAGA TAATAAAAAT GCCGTAGAAA TCGGTGGTTT TATTGATGCA
CGCGTGATCA ACACTCAAGG GGAAACTGAG GTTGTTAACG GCGCATCTCG CATTAATTTT
GGTTTTAATC GTGAGTTGAC TGACGGTTGG AAAGCCTTTG CTAAATTAGA GTGGGGCGTA
AACCCAGTTG GTAGCAGCGA TATCGTCTAT AACAATCGCT TCGAATCTGT TCAAGAAGAG
TTCTTCTATA ACCGTTTAGG TTACGCAGGT TTATCCCATG ACACTTATGG AACACTAACT
ATCGGTAAGC AGTGGGGTGC TTGGTACGAT GTCGTTTACA ACACTAACTA CGGTTTTGTG
TGGGACGGCA ACACTGCAGG TGTTTACACT TATAACAAAG ATGACGGCGC GGTAAACGGC
GTGGGTCGTG GTGATAAAAC GGTCCAGTAT CGCAATGCCT TTGGCGATGT TAGCTTCGCA
GTTCAAGCGC AGTTGAAAAA CAGCAGCTTC TATACCTGTG ATACTACAGA TGATATCAGC
CAAGCTCAGT GTCAAGCGAA CTGGGAAAGT GGTGATAAAG CGGCTCAACA AGTTGAGTAC
AATTACACCT ATGGTGGCGC GCTGACCTAT AAAGCCACTG ATATGTTGAC TTTAACTGCG
GGTATTAACC GTGGTGAGTT TGAAGTAAGC TTTGGTAATG GTGAGCAAAG AACTGCCATT
GATGTTATCT ATGGTGCCGG AATCACTTGG GGCAACTTCG ATAACGATGG TTTATATGCT
GCTGCAAACT TTAACAGACA AGAAAACCAT GATACTGACA ACATTGGTCG TTTGATCAAA
GATGCCTATG GTATTGAAAG TTTAGTTTCT TACAAGTTTG ATAATGGCCT ACGTCCATTC
ATTTCTTACA ACGTGCTTGA TGCGGGTAAA GACTATGTCA TCCAGCCTAA CTTCAATGCC
GATCCTAACG ATGAATTCAA ACGTCAGTTC TTAGTTGTCG GTTTACACTT TGTATGGGAC
CCAAATACAG TTCTGTATAT AGAAGCACGT AAAGATTACA GTGATTTTAC CAGCGCAGAC
AAAGACCAAG AAGCCAGAAT GGCACTTTCT GAATCTGATG GCGTAGCAAT CGGTATCCGT
TACACGCTCT AA
|
|---|
| Protein sequence | MNKTLVATAL AAIFLVPSVS AIEIYKDNKN AVEIGGFIDA RVINTQGETE VVNGASRINF
GFNRELTDGW KAFAKLEWGV NPVGSSDIVY NNRFESVQEE FFYNRLGYAG LSHDTYGTLT
IGKQWGAWYD VVYNTNYGFV WDGNTAGVYT YNKDDGAVNG VGRGDKTVQY RNAFGDVSFA
VQAQLKNSSF YTCDTTDDIS QAQCQANWES GDKAAQQVEY NYTYGGALTY KATDMLTLTA
GINRGEFEVS FGNGEQRTAI DVIYGAGITW GNFDNDGLYA AANFNRQENH DTDNIGRLIK
DAYGIESLVS YKFDNGLRPF ISYNVLDAGK DYVIQPNFNA DPNDEFKRQF LVVGLHFVWD
PNTVLYIEAR KDYSDFTSAD KDQEARMALS ESDGVAIGIR YTL
|
|---|
| |