Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2706 |
Symbol | |
ID | 7087085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3176238 |
End bp | 3177125 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461595 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002358619 |
Protein GI | 217973868 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.173124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000993281 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGACCG AACTGCCGCC ACTCAATTCC CTCCGCGCTT TTGAAGCCGC CGCGCGCTTG CAAAGTATGA CACTGGCAAG CAAGGAGTTG CATGTCACCC ATGGTGCGGT CAGTAAACAA ATCCGAGTAT TAGAGGATTA TTTGGGTTTT GCGCTTTTTG TGCGCTTACA TAAAAAAGTC AGTTTAACCG ATGAAGCCAA GCGCTATTTG CCCCATGTCC AAGCCGCGCT GCAAACCCTG TCAAGTGCAA CGAGTGACCT ACGCCGCCAG CCTTCTAAGC CACAAACCTT AGCCATCAAT GTGCTGCCAA GCTTAACCAT TAATTGGCTC ATCCCGAGAA TGGAGCAGTT TAAGTCACGC CATCCGCACC TTTATGTCGA TTTGTCGATT GGTGACTTTG CCGTGGACTT TAGCCAAGGC CGTTATGATA TTGCGATTCG CAGCTGCACA GCTATTCCTA AGGGCGCGAA TTATATCAAA CTGATGGATG AGGATTTGTG TTTGGTTTGC GCGCCTTCGT TAGCGCCAAA ACTGCAAAAT ATCGAAGATA TCAATCACGT CACCTTACTG AAACACACGA CAAGACCCGA ACTGTGGGAA TATTGGGCAG AAAAAGTGGG CCTAACACTC ACTCAAGCAC AAACCTTTGG CGTCGAGCAT TTCTACATGC TGAGCCAAGC CGCCGCGAGT GGCATGGGGG CAGCGCTTAT TCCGCGATTT TTTATCGAAG AGCAATTGGC AAACGGCAGT TTAGTCATTC CCTTTGACGC CCCTTTTACC AGCCCCTATC GCTATTACCT GCTCACACCC AAATCCCCTA GCCTGCCGTT AAAAGCCCAA GCTTTTATCG ACTGGTTGTT AGAAGTGTTT GCCCCTTATC GCCACTAA
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Protein sequence | MLTELPPLNS LRAFEAAARL QSMTLASKEL HVTHGAVSKQ IRVLEDYLGF ALFVRLHKKV SLTDEAKRYL PHVQAALQTL SSATSDLRRQ PSKPQTLAIN VLPSLTINWL IPRMEQFKSR HPHLYVDLSI GDFAVDFSQG RYDIAIRSCT AIPKGANYIK LMDEDLCLVC APSLAPKLQN IEDINHVTLL KHTTRPELWE YWAEKVGLTL TQAQTFGVEH FYMLSQAAAS GMGAALIPRF FIEEQLANGS LVIPFDAPFT SPYRYYLLTP KSPSLPLKAQ AFIDWLLEVF APYRH
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