| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2704 |
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| Symbol | |
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| ID | 7087083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3173764 |
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| End bp | 3174909 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643461593 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_002358617 |
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| Protein GI | 217973866 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0939258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000562374 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTA TCCACACCTC GGACTGGCAC ATAGGTCGTC AGTTACACAA TCAGTCATTA
CTGGATGATC AAGCCTTTGT GCTCGAGCAA ATTATTGCAT TAGCAGATGA GCATAAGGTG
GATGCTGTGA TTGTGGCGGG TGATATTTAT GACAGATCGA TTCCGCCAGC AAACGCGGTT
GCGTTGTTAG ATGATGTGCT CAACCGCTTA GTACAAGATT TAGGCCTGCA AGTGATTATG
ATTGCCGGTA ACCACGATGG CCACGAGCGC TTAGGGTTTG CGGCAAAACA AATGGCGGCA
AGTGGGTTAC ATATTATTGG ACCTTTGAGT GCTGACATTC ATCCTATTAC TTTGTCGAGT
TCAAGCGGTG ATGTGGTTTT TTATCCCTTG CCTTACGCTG AACCTGCAAC AGTTCGCCAA
GTGTTTGAGT GTGAGGCATC GAGTCACGAA ATGGCCATGG ATGTGTTGCT GGAAAAAGTG
CGCCAGCACG ATAGCCAAGG CTTACCCAAA GTGGTGATCA GCCATTGCTT TTTGGATGGT
GGCAGCGAAT CTGAATCAGA GCGGCCGCTC AGTATTGGTG GCGCCGATAA AATATCGCCA
AAGCTCTTTA CTGAGTTTGA TTATGTCGCC CTTGGGCATT TGCACGGACC GCAATACAAA
GGCGCCGAGC ATGTACGCTA CTCAGGCTCG ATTTTGAAGT ATTCCTTTAG CGAACAACAT
CAACACAAGT CGGTGACCTT AGTCGAACTG AGCACGCAAA CGCCGATTGA TATCCGTTTA
TTGCCGTTAA CGTCGATGCG TGATGTTCGC ATCTTAGAAG GGGAGTTAGA CACTTTACTC
GCCCAAGGTA AAATGGATGC AAAGCGTGAG GATTACCTCA TGGTCAGGCT CCTCGATAAA
CATGCCATTT TAGACGCCAT GGGCAAACTT AGAGCCGTCT ACCCTAATGT GCTGCATTTA
GAGCGGACAG GCTTGATGGC GGGGCAGCAG CAAGTTGCTT TGAGCCGGGA CCATATCAAA
AAAGGCGAGA TGGACATGTT TTGTGACTTT TTCTCCCAGG TGTCTGGCGA GTCATTGACG
CAGGCACAGC AAGCCGTGAT GGATGACCTC CTGACTAAGC TGCACAATGA GGAGCGCCAA
GCATGA
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| Protein sequence | MKFIHTSDWH IGRQLHNQSL LDDQAFVLEQ IIALADEHKV DAVIVAGDIY DRSIPPANAV
ALLDDVLNRL VQDLGLQVIM IAGNHDGHER LGFAAKQMAA SGLHIIGPLS ADIHPITLSS
SSGDVVFYPL PYAEPATVRQ VFECEASSHE MAMDVLLEKV RQHDSQGLPK VVISHCFLDG
GSESESERPL SIGGADKISP KLFTEFDYVA LGHLHGPQYK GAEHVRYSGS ILKYSFSEQH
QHKSVTLVEL STQTPIDIRL LPLTSMRDVR ILEGELDTLL AQGKMDAKRE DYLMVRLLDK
HAILDAMGKL RAVYPNVLHL ERTGLMAGQQ QVALSRDHIK KGEMDMFCDF FSQVSGESLT
QAQQAVMDDL LTKLHNEERQ A
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