Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2703 |
Symbol | |
ID | 7087082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3170711 |
End bp | 3173767 |
Gene Length | 3057 bp |
Protein Length | 1018 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643461592 |
Product | SMC domain protein |
Protein accession | YP_002358616 |
Protein GI | 217973865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0776806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000173958 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGACCCC TTAGCCTTTC AATGTCAGCC TTTGGTCCCT TTGCATCGAC TCAGGCACTT GATTTTACAG CTCTTGGAAC CAATCCGTTA TTTCTCATCA ACGGGCCCAC AGGCGCGGGC AAGACGACCT TGCTCGATGG CATTTGTTTT GCGCTCTATG GCAAAACCAC TGGTAATGAG CGTGAAGGCA GCCAAATGCG CTGCGATATG GCCGACGATA GTTTACTAAC AGAAGTCACT TTCAGTTTTC AGCTCGGTAG TAACAGCTAT CGTATTCGCC GGGTGCCAGA GCAAGACAGA GTTAAGAAAA GCGGTGACGG CTCGACAGTG CAAAAGCCTG AAGCGCAGCT CTTTAAAATT GACGCCGATG GCAATGAAAG CTTATTAGTT GCCAGTAAAG TGTCCGAGGC CACCGCTGAG ATTGAAGCTT TGACTGGGCT CGATGTGGAG CAGTTTCGCC AAGTGATGGT ATTACCTCAG GGTAAGTTTC GCGAATTATT AATGGCGGAC TCTAAAGCGC GTGAGCTGAT ATTTAGTCAG TTATTTCAAA CGCATATTTA TCGCCGGATT GAAGATACTT TAAAAAATAA GGCTGCCGAT ATTAGCGCCT TAGTGAAAGA TCAACGCAGC CGCCGCGATG GTATTTTACA AAGTGCGGGC CTAGCATCCG ATGACGAGCT AAGCAATGAA TTAGCCAAGC TCACACCTGA ACTTGCGCTC GCTCAAAGTG CCAAGGAACA GGCATTACAG CAGCAACAAT TAATCATTAA AGCCAGCGAT GCCGCCCAGC ATCTACTGGC TGAGTTTGCG CAGTTTGATA CCTTAACTCA AACGGCTGCA GCGCTCGAGG CGCAGCAAGA AAGCATAGTC GCGCAAACCC ATAAGCTGAA CTTAGCCGAA CAAGCGCAGC GTTTAGCGCC TATGATTGAG GTGTTTTTGG CTCGTGAACA AGAAGCAAAA GCCGCCAATC TCGCTTTTAG TCATGCGCAA ACGGCGTTGA CTCAGGCCAA GCAAGCCTTT GATGATGCCG AGCTCAAAGC GCAAGACTTA CCCGTATTGG AAGCGTCGCT ACTGGAACAG GAACAAGCCA AACAGCAACT GAATGCGCTA GGGCCGCAGC TTAGGGAACT GGATAGACTC AATAAAACCC TCGAGCAAGA GCAAGCGCAG TTAGTTAAAG CTAAAACACA GCTTCAGATC AGTAAAAATG AGTTAACCGC CGCTAGCCAA AAACGCCGTG AACTGGAATC GGCTTTGCCA CAATTGCAGG CCAACAGCGA CACTCGCCTC ACATTGCAAC AGGCGCACCA GCAGCAACAG CAGTTATTGT CGACTTATCA GCAATGGCAA CAAGTGGCGA CAAGGGTATC GTCGACAAAG GCAAAACTTG CCAATGCGAA AGCGCAAGGG CAACAACTCA ATGCCGAGCA TCAGCAAGCA CAGGTTGCGC ATAAAGCCTT ATTAATAACT TGGCACCAAG GACAGGCAGC CATTTTAGCG CGGCAATTAC AGCAAGATGA ACCTTGTCCC GTCTGTGGCA GCCAAATCCA TCCGCAGCCA GCACAGAGCC AAGAGCCGCT CCCAAGTGAT GAAGCGCTGC AATTGGCCCA AGACGCTGAA ACGACGGCCC AAGAAGTCCT GAGCAAAGCC AGAGCGGAAT ACCGTGGATT ACAAACACAG TTAGAAACCT TGCAGCAACA AGCGCAAGAT CTCGCGGCCC AATTGGGCAC AGCGGTTGAT ATTTCTCAAG ATCAACATGC GCATACCTTG TCGCAATATG CATTTTCCCT CACGCAAGCT GAGCAAGCTC ATCAAGATTT GCAGCAGTTA CAGCAAGAGA TTGTATTGTT GCACGCGCAG GAAACGCATC TGCAACAAAA GCTGGAGCAA GGACAAACAC ACGACAGTGC TCTGCAATCT AAAGTGGATT TATTGCAGGG GCAGTTGGCG CACATGCAGC AAAGCGTCCC ACCTGCGCTT GCAACGCTTG AGGCATTAAC CGCAGCAATA ACGCAAAACC AGCAACAGAT AAGCCATATT AAACAGCAGA TTGCTGACGT GAGGGCGCTT CAGCAACAAA CAGGGCAAAC CTTTGTTGCA GCTAAAGCTG CATTGAATGG TGCCGAAAAT ACCGCTGAGG CGGCATTAGC TCAGCAAACG CGCGCCCAGC AGCAACTCAA TCAGCAATTA GTCGCAGCGG GGTTTACCGA CCAACAGGCC TTATTTGCGG CCATGCTGGA TGAAGATCAA CTGCATGCAT TAGCCAGCGA GATTGAGGCT TACCAGCAGC GCAGTGCTTT GACCAAGGCG CAGTGCGAGC AGTTAGCGCT GAAGCTTAAA GATAAAGTGC CACCCGATAG CATTAAGCTC GCTGCCGAGC TTGAGTCGGC GCAGCAAGCA TTACACGCAG CAGAGCAGGT ATGGCAGCTA CTTCATACTC GCACAGTATT GCTCACACAA ACTCAAACCC AGCTCAGTAT TGCAGATACG AAAGCTAAGG CGTTAGACGA TGAATATGCG GTTATCGGCA CGCTTGCCGA TGTGGCGAAT GGGAAAACAG GAAATAAGAT CAGTTTGCAG CGTTTTGTGT TAAGCGTACT GCTCGACGAT GTGTTACTCG AAGCGAGCCA TAGGCTGCAT CTGATGAGTA AGGGACGTTA TCGCTTGCTG CGTAAGGAAG ATAGAGCAAA GGGCAACAAG GCGTCTGGGC TCGAGTTAGA AGTGGAAGAT GCCTACACCT CAAAAGTGCG CCCAGTGGCA ACCTTAAGCG GCGGCGAAAG TTTTATGGCG GCCTTGTCCA TGGCGTTAGG GCTATCCGAT GTGGTGCAAG CTTATGCTGG GGGGATCAAA CTCGACACCT TATTTATCGA TGAAGGCTTT GGCAGTTTAG ACCAAGATTC ATTGGAATTG GCGATTCGAA CCTTGATGGA TCTGCAGTCT TCGGGCCGCA TGATAGGGGT GATCTCGCAC GTTTCTGAGA TGAAAGAGCA GATAAATACT CGCATCGACA TCAATAAAAC CTCACATGGG AGCGAAATGA CGATAGTTTT GCCTTAG
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Protein sequence | MRPLSLSMSA FGPFASTQAL DFTALGTNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE REGSQMRCDM ADDSLLTEVT FSFQLGSNSY RIRRVPEQDR VKKSGDGSTV QKPEAQLFKI DADGNESLLV ASKVSEATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKARELIFSQ LFQTHIYRRI EDTLKNKAAD ISALVKDQRS RRDGILQSAG LASDDELSNE LAKLTPELAL AQSAKEQALQ QQQLIIKASD AAQHLLAEFA QFDTLTQTAA ALEAQQESIV AQTHKLNLAE QAQRLAPMIE VFLAREQEAK AANLAFSHAQ TALTQAKQAF DDAELKAQDL PVLEASLLEQ EQAKQQLNAL GPQLRELDRL NKTLEQEQAQ LVKAKTQLQI SKNELTAASQ KRRELESALP QLQANSDTRL TLQQAHQQQQ QLLSTYQQWQ QVATRVSSTK AKLANAKAQG QQLNAEHQQA QVAHKALLIT WHQGQAAILA RQLQQDEPCP VCGSQIHPQP AQSQEPLPSD EALQLAQDAE TTAQEVLSKA RAEYRGLQTQ LETLQQQAQD LAAQLGTAVD ISQDQHAHTL SQYAFSLTQA EQAHQDLQQL QQEIVLLHAQ ETHLQQKLEQ GQTHDSALQS KVDLLQGQLA HMQQSVPPAL ATLEALTAAI TQNQQQISHI KQQIADVRAL QQQTGQTFVA AKAALNGAEN TAEAALAQQT RAQQQLNQQL VAAGFTDQQA LFAAMLDEDQ LHALASEIEA YQQRSALTKA QCEQLALKLK DKVPPDSIKL AAELESAQQA LHAAEQVWQL LHTRTVLLTQ TQTQLSIADT KAKALDDEYA VIGTLADVAN GKTGNKISLQ RFVLSVLLDD VLLEASHRLH LMSKGRYRLL RKEDRAKGNK ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF GSLDQDSLEL AIRTLMDLQS SGRMIGVISH VSEMKEQINT RIDINKTSHG SEMTIVLP
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