Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2684 |
Symbol | |
ID | 7089969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3151044 |
End bp | 3152741 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643461573 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_002358597 |
Protein GI | 217973846 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.287497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00116896 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTTTGA TCCTATTATT GACCCAACAG ATGTCGCTGT ACTTAGTGAT CGTTTACTTA GTCAGTAAAA CGCCGCTGTT TAAACTGTTT GCCGAAACCT CCCCGCGTCT GCCACATAAG ATTTTTATGT ATCTGATTTT TTCAAGTTTC TGCATCATGG CCACCTATTT TGGTGAGCAA ACATCAGGCG CGATTGCCAA CACCCGTGCT ATGGGCGCTG TCTTAGGTGG ATTACTAGGC GGACCCGTTA CCGGTTTTCT AGTTGGACTG ACTGGCGGAC TGCATCGCTA CAGTATGGGC GGCTTTACTG AAATAGCCTG CGCCATTTCC ACCACCTTAG AAGGCCTATC CGCAGGGATG ATAAGCTTCT ACTTAAGACG TGCGGGTAAA AGTGAGCTTA TCTACAATCC ATTACTCGTT TGCCTAGTGA CTTTTTATGC CGAAATGATG CAAATGAGCA TCATCTTACT GGTCGCCCGC CCCTTCGATG ATGCGTGGGA ATTAGTGCGC CAAATCGCGC CGCCCATGTT GTTAGTCAAT TCCGTAGGAG CGGCACTCTT TATGAGCATG ATCCGCGACC AAAAAACTAT GTTCGATAAA CTCTCCTCCA GTTTTTCAAC TAAAGCATTA AAGATAGCCG AACGCAGTGT CGGACTCCTA TCCAAAGGAT TTAACGAAGA AAGCAGCAGC CGTGTCGCCA AAATCGTCAT AGAAGAAACC AATGTGGGCG CAGTAGCTAT CACTGACAGG GAAAAACTGT TGGCTTTTAT TGGCATAGGT GCCGATCATC ATCTGCCTGG TACGCCAATT TCTTCCAAGA TCACCTTAGA GGCGATCAAT CAGAATAAAG TCATGTTCGC CGATGGCGTT GAAATGCCCT ATTCATGTTC TATTTCAAGC AACTGCCGCT TAGGGTCGAG TCTGGTGATC CCACTGCGCA GTGATACCGA AGTCATTGGC ACCATTAAAC TCTACGAGCC GAAAAATAAG CTTTTTTTGA ATATTAACCG CACCTTAGGT GAAGGTATTG CCCGTCTGTT ATCAAACCAG ATTCTTTATG GCCGGTTTGA GCAACAACAA AATCTGCTGA CTCAAGCCGA ATTAAAATTA CTGCAAGCGC AGGTTAATCC GCACTTTCTG TTCAATGCAC TCAATACCAT TAGCGCAATT ATCAAGCGCG ATCCCGATAT GTCTAAGCAG TTGCTGCAGC AGTTATCTCA ATTTTTACGG ATTAATTTGA AGCGAACGAC AGGCTTAGTG ACGCTTGGGG ATGAGCTAGA TCACATCGCG TCCTATCTCA CCATTGAAAA AGCGCGTTTT ATTGATAAAT TACAAGTCAG TATCGCGATA CCTGAATCAC TCTACCACTG CAAAGTACCG GCCTTTACCC TGCAGCCGAT TATTGAGAAT GCCGTAAAGC ACGGCACTTC GCACATGATA GAGCAAGGGC AGATCAAAGT GACGGGCAAG CTCGAAAATG ATGTGCTGGA ATTAGAAGTC ACAGACAATG CCGGATTATA TCAGCCCGTT GAGGGCTCTG AAGGCCTAGG GATGAACTTA GTGCATAAAC GCATTCAAAA TATTTTTGGC GAACAATATG GTGTCACTGT GGAATGCGAA GCCGATGAAT TGACTCGTGT CACCATAAGA TTACCCATAG AAAACCCTGA AATATCCAAT ATGGACACCC GCACGTGA
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Protein sequence | MSLILLLTQQ MSLYLVIVYL VSKTPLFKLF AETSPRLPHK IFMYLIFSSF CIMATYFGEQ TSGAIANTRA MGAVLGGLLG GPVTGFLVGL TGGLHRYSMG GFTEIACAIS TTLEGLSAGM ISFYLRRAGK SELIYNPLLV CLVTFYAEMM QMSIILLVAR PFDDAWELVR QIAPPMLLVN SVGAALFMSM IRDQKTMFDK LSSSFSTKAL KIAERSVGLL SKGFNEESSS RVAKIVIEET NVGAVAITDR EKLLAFIGIG ADHHLPGTPI SSKITLEAIN QNKVMFADGV EMPYSCSISS NCRLGSSLVI PLRSDTEVIG TIKLYEPKNK LFLNINRTLG EGIARLLSNQ ILYGRFEQQQ NLLTQAELKL LQAQVNPHFL FNALNTISAI IKRDPDMSKQ LLQQLSQFLR INLKRTTGLV TLGDELDHIA SYLTIEKARF IDKLQVSIAI PESLYHCKVP AFTLQPIIEN AVKHGTSHMI EQGQIKVTGK LENDVLELEV TDNAGLYQPV EGSEGLGMNL VHKRIQNIFG EQYGVTVECE ADELTRVTIR LPIENPEISN MDTRT
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