| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2658 |
|---|
| Symbol | |
|---|
| ID | 7089943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3125270 |
|---|
| End bp | 3126829 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643461547 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_002358571 |
|---|
| Protein GI | 217973820 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000674443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00128073 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATC TCATTCGCCA CAAAACGTCT AGCCATAAAG CCGATGTGCT TTCAGGGCTA
ACAGTTGCAC TTGCGCTTAT CCCAGAAGCG GTCGCATTTG CCTTTGTCGC CCATGTAGAG
CCTATGGTTG GACTTTATGC CGCCTTTATC ATGGGACTTA TCACGGCACT GATTGGTGGC
CGTCCAGGGA TGATTTCGGG CGCGACAGGC GCGATGGCCG TTGTCATGGT GTCTTTGGTC
GTAGAGCACG GTGTCCAATA TTTATTTGCT GCCGTAGTCT TAGCGGGACT CATCCAGATC
TCAGCTGGGG TATGTAAACT CGGTAAATTT ATTCGGATTG TGCCCTATCC CGTCATGATT
GGCTTTGTGA ATGGTCTGGC GATTGTGATT TTCCTCGCCC AGCTAGGTCA GTTTAAGGTC
AAGGATGCCA GCGGAAACTT AGTCTGGTTG CCGCAAGAAC CATTAATGCT GATGTTAGGC
TTAGTGGCAC TGACGATGGC TATCATTTAT TTTTTGCCTA AGCTCACCAC AGCAGTGCCT
TCATCACTAG TCGCAATCCT CACTGTGACG GCAATTGTCG TCGGACTCGA TCTTGATACT
CGTAATGTCC TCGACTTCCT AAAAACCATG AGTGGTAATG ACAATGCGAC GATAGCGGGT
TCATTACCTA GCTTTGCGAT TCCCTCTGTG CCTTTTAATC TTGAAACCTT ATATATCATC
CTGCCCTACT CCTGCATCTT AGCGGCTGTT GGTCTTATCG AATCACTGCT GACATTAACT
GTGATAGATG AGATGACCAA TACCCGTGGT CGCAGCAACA AAGAATGCGT CGGCCAAGGT
CTTGGGAACA TCACCAGCGG CTTCTTCGGC GCTATGGGTG GTTGTGCCAT GATAGGTCAA
TCGATGATTA ACATTAACTC GGGTGGACGC GGCCGATTAT CAGGAATTAC TGCAGCAGTC
GCCCTGCTTG CCTTTATCTT ATTTGGCGCT TCATTTATTG AGATAATCCC ACTTGCGGCG
CTAGTTGGGG TGATGTTTAT CGTTGTGCTC GGCACCTTTG AATGGGCAAG CTTTAAGTTT
ATGGGCAAGG TCCCGAAACA TGATGCTTTC GTTATCGTGC TAGTGACGAC GGTAACCGTA
TTTACCGATC TGGCATTTGC GGTATTTGTC GGCGTAATCG TTTCAGCCTT AGTCTTTGCC
TGGGAACATG CCAAGCATAT TAATGTGACG GAAGAGCAGA ATGAGCAAGG CTGGAAAGTC
TATAAACTCA ATGGCCCATT GTTTTTCGGC TCAATTGCGA ACTTCCTCGA GCTATTTGAC
CCATCAAAAG ATCCACAAGA TGTGGTTATC GACTTTAAGA ACTCTCGGGT TGCCGATCAT
TCCGCATTGG AAGCAATAGA CACGCTCGCT GAACGTTATG TCAATGCAGG TAAGAAGTTG
CACTTGATCC ACTTAAGCGC TGACTGTAAA GCACTGCTGC ATAAAGCGGG AAATCTTGTC
GAAGTGAATC AACTCGATGA TCCTCACTAT AAAGTGGCCG ATGATAAGCT GGATTCGTAA
|
|---|
| Protein sequence | MFDLIRHKTS SHKADVLSGL TVALALIPEA VAFAFVAHVE PMVGLYAAFI MGLITALIGG
RPGMISGATG AMAVVMVSLV VEHGVQYLFA AVVLAGLIQI SAGVCKLGKF IRIVPYPVMI
GFVNGLAIVI FLAQLGQFKV KDASGNLVWL PQEPLMLMLG LVALTMAIIY FLPKLTTAVP
SSLVAILTVT AIVVGLDLDT RNVLDFLKTM SGNDNATIAG SLPSFAIPSV PFNLETLYII
LPYSCILAAV GLIESLLTLT VIDEMTNTRG RSNKECVGQG LGNITSGFFG AMGGCAMIGQ
SMININSGGR GRLSGITAAV ALLAFILFGA SFIEIIPLAA LVGVMFIVVL GTFEWASFKF
MGKVPKHDAF VIVLVTTVTV FTDLAFAVFV GVIVSALVFA WEHAKHINVT EEQNEQGWKV
YKLNGPLFFG SIANFLELFD PSKDPQDVVI DFKNSRVADH SALEAIDTLA ERYVNAGKKL
HLIHLSADCK ALLHKAGNLV EVNQLDDPHY KVADDKLDS
|
|---|
| |