| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2656 |
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| Symbol | |
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| ID | 7089941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3120149 |
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| End bp | 3121108 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643461545 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002358569 |
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| Protein GI | 217973818 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0425559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000122586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATAG AATCCACCCC ACAACAGGTT CAGTTGATCA CGATTGATGA AGATCACTTC
GAACAGCGTA TCGATAACTA CTTAATGACC AAGCTGAAGG GCGTGCCGAA AAGCATGATC
TATCGCATTG TCCGCAAGGG CGAGGTTCGA GTAAATAAGA AACGCATCAA ACCCGAGTAC
AAGTTGCAGA TTGGCGACAT AGTGCGTATT CCGCCTGTCC GAGTGGCAGA GCCAGATAAC
CGTACTGCAC CATCGCCTAA CTTAAGTAAA GTCTCGCAAC TCGAAGACCG TATTTTGCAC
GAAGACAATC ATTTGATCGT GCTGAATAAA CCTGCTGGCA TTGCTGTGCA TGGTGGTAGT
GGTGTTGATT ACGGCGTGAT TGAAGCCCTG CGTTCACTGC GTCCTCAACA AAAGTTTTTA
GAGCTAGTAC ATCGTCTCGA TAAAGATACT TCGGGTGTGT TATTGGTGGC GAAAAAGCGT
AGCGCGCTTA AACATCTGCA TGATCAGCTC AGATATAAAA AGATGCAGAA AGACTATTTG
GCCTTAGTTA AAGGTGAATG GTCTGCTCAA GATAAAGCCG TTAAACAGCC TTTATTAAAA
ATCACCCTAA AATCCGGTGA GCGCATAGTG CGTGTTAATG CGGAAGGTAA GCCTTCTGAA
ACGCGCTTTA AAATTATGCA GCGTTACCAA GGTTGTACTC TCGTGAAGGC AAGCCCTGTC
ACTGGGCGAA CTCACCAAAT TCGGGTGCAT TGCCAATTTG CGGGTCATCC TATCGCATGT
GATGATAAAT ACAGCGAGCA AGGTTTTGAC GACAGCATGC GTTCATTAGG CTTAGCTCGA
CTCTTTTTAC ATGCGGCTGA GTTGATGTTC ATTCATCCTG AAAATGATGA AGTGATGCGG
GTCTCTGCGC CCTTAGATGA AAACTTGTCG CAATTATTAG ATAAGTTAAA GCGTGTGTAA
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| Protein sequence | MNIESTPQQV QLITIDEDHF EQRIDNYLMT KLKGVPKSMI YRIVRKGEVR VNKKRIKPEY
KLQIGDIVRI PPVRVAEPDN RTAPSPNLSK VSQLEDRILH EDNHLIVLNK PAGIAVHGGS
GVDYGVIEAL RSLRPQQKFL ELVHRLDKDT SGVLLVAKKR SALKHLHDQL RYKKMQKDYL
ALVKGEWSAQ DKAVKQPLLK ITLKSGERIV RVNAEGKPSE TRFKIMQRYQ GCTLVKASPV
TGRTHQIRVH CQFAGHPIAC DDKYSEQGFD DSMRSLGLAR LFLHAAELMF IHPENDEVMR
VSAPLDENLS QLLDKLKRV
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