| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2540 |
|---|
| Symbol | |
|---|
| ID | 7086106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3024746 |
|---|
| End bp | 3025180 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643461433 |
|---|
| Product | protein TolR |
|---|
| Protein accession | YP_002358457 |
|---|
| Protein GI | 217973706 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000662541 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000251452 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAG CTTATCAGCG CAAACGTCGT CGCCCCGTTG CCGAAATCAA CGTGGTGCCC
TATATCGACG TGATGCTCGT GCTGTTAATT ATTTTTATGG TAACAGCGCC CATAGTCACC
CAAGGGGTAA AAGTGGAGCT GCCTCAAGGG GCTGCGGAAG TTTTACCTGC TGACAGTAAG
CCACCTGTGG TGGCTTCGAT TGACGGTGAC GGTGATTATT ATCTGAATAA AGGCGGTTCA
ACTAACGTAC CTATGGACTT GGAAGAACTG GCGACGGAAG TTGCTGCGCT TATGGTGACA
GAGCCTGAGC GTCCAGTGGT GGTTAAGGCC GATAGAAATA TTCCTTACGA TAAAGTGATT
CAGTTGATGG TGACCTTGCA AGGTGCTGGC GTGCCATCAG TCGGTTTGAT GACGGATTCA
CCCAAGGAGA AATAG
|
|---|
| Protein sequence | MQPAYQRKRR RPVAEINVVP YIDVMLVLLI IFMVTAPIVT QGVKVELPQG AAEVLPADSK
PPVVASIDGD GDYYLNKGGS TNVPMDLEEL ATEVAALMVT EPERPVVVKA DRNIPYDKVI
QLMVTLQGAG VPSVGLMTDS PKEK
|
|---|
| |