| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2531 |
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| Symbol | |
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| ID | 7086097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3010286 |
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| End bp | 3013726 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643461424 |
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| Product | histidine kinase |
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| Protein accession | YP_002358448 |
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| Protein GI | 217973697 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.014523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00504999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTAA CCTTAGTCGT CGCCGTTATT GCCGTCTGTT ATGTCTCGCT TTTATTCCTA
TTAGCGTGGG GGGCGGAGCG TTGGTTTAGC CGGATCACCA AAAAGCTACA GGTCGGTATT
TATGGCCTGA GCTTAGCGGT CTACTGCTCT TCGTGGAGTT TTTTAGGCAC AGTCGGCCAA
TCGGCTAAGG ATCTCTGGTC TTTTTTACCG ATTTTTATCG GCCCCATTCT GATTTTCACC
TTAGGTTTTG GCATGTTACG CAAGATGGTA TTAGTGTCTA AGGCACAAAA TATCACCTCA
GTGGCCGACT TTATTGCCGC CCGATACGGC AAATCCCAAA CCTTAGCCGC CTTAGTCACC
TTAATCGCCT TGTTTGGCAT CATGCCCTAT ATCGCCCTGC AGCTTAAGGC GATGGTGTTC
AGCCTTAACC TGTTTCAACC CGCAGACGAT CCCCTCGATG GCGTGACTAT CCCGTTACTG
ATCACGTCTT TGTTAGCCAT ATTTGCCATT TTATTTGGTA CCCGTAAGCT CGATGCCACC
GAGCATAATC CCGGCATGAT GCTCGCGATT GCCTTTGAGT CTCTGGTGAA GATCGCCGCA
TTTTTATTGG TCGGCGTAGT CATTAGTTTT GGGGTGTTCG ATGGTTTTGG GGATATTTGG
CAGCAGGCGA ATGCGCAGTC GCTGATCAAT TATCCCAATC CCCGTATCGA AGCTTTAATG
CCTGAGTTAC TTGTCGGAAT GGCGGCGTTT TTGTGTATGC CAAGGCAGTT CCATGTGATG
GTGGTTGAAT GCGCCGATGA GTCTGTGTTG TCGAAAGGAC GTTGGCTGTT TCCCATCTAT
TTAGCGCTTT TTGGTTTATT CGTTGGGCCG CTCGCCTTGG CGGGGAAGAT CATCCTCGGC
GATTCTGTGT CGGCCGATAC CTATGTGATT AATTTGCCAC TCGCCTTAGA TCAACCTTTG
CTGGCGGTGA TTGCGCTGCT GGGCACTCTT TCGGCGGCAA CCGGCATGGT GATAGTGGCG
GTGGTGACTA TTAGTGTGAT GGTGAGTAAC GAATGGCTGG TGCCTGTGAT GCTGCGCACG
GGCCATATCC GCGAGAAAAA CTTCAGCCAG TTCTCGCAGC TACTACTCAA TGCTCGCCGT
TTGGCGATCG TGATCATTCT TGGCTTAGGT TATGGCAGTT ATCTGGCCTT AGCGGACAGT
GATTCCTTAT CCCATCTCGG CATGTTGTCC TTCGGGGCTT TTGCTCAGTT AGCGCCTGCC
TTAGTGGGCG GACTCTATTG GAAACACGGC AATCGTGCTG GGGTGTTTTT AGGACTCGGC
GTAGGCTTTT CGCTGTGGTT TTACATCATG TTGCAGGGCA TGACAGATGT GCAAAGTTCA
TCGATGTTCT TGTCTGGCGT CGTTAGCGAG AAAGGCTTGC TAGATGCGAT AACGCCCAAT
GTGCGTGATG CGCTGACGGC ACTTTTTGCC AATATCGCCT GTTATATTTT GGGGTCGATT
TGGTTTAGGG CGGGGGTGGC CGAGCGTATT CAGGCCAGTG CCTTTGTCAG TCCTGGCAAG
TTGAAAAACA GCGCCAATAA GAAAAATGGC CCGATTTCAC AGCAGGATTT GCTTATTCTA
GCCAGTCGAT TCGTCAGCCC AACACGCGCC TACGAGAGTT TTAGCCGTTT CTCTATTGAT
GCGGTAAAAA GTGATAGTTG GCATAAAGCG GCGCCGCCTG AGCTGATTTT CCACACGGAA
CGTTTATTGG CGGGCGTACT CGGCGCCTCA AGCGCAGCGC TGGTGATGGA TTCTGTGCTG
CAAGGGCGTG ATTTGGCGCT GGATGAAGTG TTCAGTCTAG TGGATGAAGC TTCATCGAAA
ATTATGCTCA GCCAAGACAT GCTGCGCGGC GCGATTGAGC ACGCCTATGA AGGCATGAGC
GTGATAGATA ACGATCTCAA CCTAGTAGCT TGGAATTATA AATATGTGGA GCTGTATCAA
TATCCCGATG GATTCTTGCA GCAGGGCATG CCCATCAGCG AAGTGATCCG TTTTAATGCG
GCGCGGGGTT ATTGTGGTGA AGGGGAAATC GAACAGCAGG TTGAACAGCG GGTGCAGCAC
ATGCGTAATG GCACGCCGCA CACTTCTGAG CGCCATCGCA GGGACGGTAA AGTGATTAAA
ATTCAAGGTA ATCCCATGCC AGACGGTGGC TTTGTGATGA CCTTTACCGA TATTACTCAG
TATCGCGAGC AGGAGCGCGC GCTGCTCGAG GCCAATGAAA CCTTAGAAAG CCGCGTTAAC
GAACGTACCT ATGAATTAGC CATGTTGAAC AGCGAGTTAC TGGAAGCTAA GGCTCAGGAA
GAAATTGCCA ACGCCTCTAA GAGTCGCTTC TTAGCCGCCG TTGGCCATGA TTTAATGCAG
CCGCTGAATG CCGCGCGGTT GTTTACCGCA TCTTTATCTC AGTATCCCAA TTTAGATCGC
GAGGCCAGAA CCACCTTATC CCATGTGAAC AGCTCGCTTA AGATCGCCGG CGAGTTGCTT
ACCGATCTGC TGGATATTTC TAAACTCGAT TCTGGCATGG TGGAGGTGAA TCGGCGTGAC
TTTGCGATTT CAGAACTGAT CAACGGTTTA TCCGTTGAAT TTGAAGCGAT GGCGGCGGAC
AACCAAATCC GCTTTAAGAT GATCCCATGC AGTGCGACCG TTAATTCTGA TCCTTCGCTA
TTACGTCGAG TCCTACAAAA TTTTTTAACC AATGCCTACC GTTACGCCCG TGGCGGCAGA
GTCTTGTTTG GTTGTCGCCA TCGCGGTCAT TACCTTGAGA TCCAAGTATT GGACACGGGT
TGTGGTATCG ATGAAAAAGA AACCCAAGAG ATTTTCAAAG AATTCAAACG GCTGAATAAT
CCTAAGAGCA ACAATGTCAG CGGATTAGGC TTAGGTTTAG CAATTGCCGA TCGTATCAGT
AAAGTGTTAG AACACGGTAT TCAAGTGTCG TCCCATTTAG GGCGCGGCTC GGTATTCTCT
ATTTGTGTGC CGCTCGGGGA GACTGTACGC CAGCCACAAG TGAAGGCGTT GCCATCGCTG
TTGCAGCCAT TATCGGGTAT CAAAGTGCTG TGTATCGATA ACGAAGAGGC TATTCTGGCT
GGCTTAGAAA GTCTATTAAG TCGTTGGCAA TGTGAGGTTA TTTGCGCAAA AGATTTATCC
GATGCACGCA TTAAGCTGGG GCTGAAAGGC GTCGCGCCCG ATATTGTGCT CGCCGATTAT
CACTTAGATG ATGGCCAAAA TGGCGTCGAT GCGATGGACG GTATTCGTGC CCTGTATGGC
AAAGACTTGC CCGGCATTTT GATCACCGCC AATACCCGTA AAGAGCTGGT GGAAGATGTG
CAACGCCGCG GCTATCACTA TATGGCGAAA ATGATAAAAC CTGCCGCGCT GCGCGCCTTG
ATTTCTAGCT TAGTGAAATG A
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| Protein sequence | MNLTLVVAVI AVCYVSLLFL LAWGAERWFS RITKKLQVGI YGLSLAVYCS SWSFLGTVGQ
SAKDLWSFLP IFIGPILIFT LGFGMLRKMV LVSKAQNITS VADFIAARYG KSQTLAALVT
LIALFGIMPY IALQLKAMVF SLNLFQPADD PLDGVTIPLL ITSLLAIFAI LFGTRKLDAT
EHNPGMMLAI AFESLVKIAA FLLVGVVISF GVFDGFGDIW QQANAQSLIN YPNPRIEALM
PELLVGMAAF LCMPRQFHVM VVECADESVL SKGRWLFPIY LALFGLFVGP LALAGKIILG
DSVSADTYVI NLPLALDQPL LAVIALLGTL SAATGMVIVA VVTISVMVSN EWLVPVMLRT
GHIREKNFSQ FSQLLLNARR LAIVIILGLG YGSYLALADS DSLSHLGMLS FGAFAQLAPA
LVGGLYWKHG NRAGVFLGLG VGFSLWFYIM LQGMTDVQSS SMFLSGVVSE KGLLDAITPN
VRDALTALFA NIACYILGSI WFRAGVAERI QASAFVSPGK LKNSANKKNG PISQQDLLIL
ASRFVSPTRA YESFSRFSID AVKSDSWHKA APPELIFHTE RLLAGVLGAS SAALVMDSVL
QGRDLALDEV FSLVDEASSK IMLSQDMLRG AIEHAYEGMS VIDNDLNLVA WNYKYVELYQ
YPDGFLQQGM PISEVIRFNA ARGYCGEGEI EQQVEQRVQH MRNGTPHTSE RHRRDGKVIK
IQGNPMPDGG FVMTFTDITQ YREQERALLE ANETLESRVN ERTYELAMLN SELLEAKAQE
EIANASKSRF LAAVGHDLMQ PLNAARLFTA SLSQYPNLDR EARTTLSHVN SSLKIAGELL
TDLLDISKLD SGMVEVNRRD FAISELINGL SVEFEAMAAD NQIRFKMIPC SATVNSDPSL
LRRVLQNFLT NAYRYARGGR VLFGCRHRGH YLEIQVLDTG CGIDEKETQE IFKEFKRLNN
PKSNNVSGLG LGLAIADRIS KVLEHGIQVS SHLGRGSVFS ICVPLGETVR QPQVKALPSL
LQPLSGIKVL CIDNEEAILA GLESLLSRWQ CEVICAKDLS DARIKLGLKG VAPDIVLADY
HLDDGQNGVD AMDGIRALYG KDLPGILITA NTRKELVEDV QRRGYHYMAK MIKPAALRAL
ISSLVK
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