| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2506 |
|---|
| Symbol | |
|---|
| ID | 7087042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2982344 |
|---|
| End bp | 2983870 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643461399 |
|---|
| Product | SpoVR family protein |
|---|
| Protein accession | YP_002358423 |
|---|
| Protein GI | 217973672 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2719] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000176707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATAA CTAAATCAAC ACCTTGGACA CCACTGAGCG ATGGTCCTGA CTGGAGCTTC
GAGCTACTGC AGGACTACCT CAAGGAAATT GAACGGGTAG CTGCACTGTA TAAGCTCAGC
ACTTACCCAA ATCAAATTGA AGTCATCACA GCTGAGCAGA TGATGGATGC TTATGCGGGC
ATAGGTATGC CCATTGGTTA CACCCATTGG TCCTTTGGCA AACGTTTTAT CGAAACCGAG
CAAGGTTACA AGCGCGGCCA AATGGGGCTT GCCTACGAAA TTGTGATTAA TTCTAACCCC
TGTATTGCCT ACCTTATGGA GGAAAACACC ATCACCATGC AGGCGCTGGT GATCGCTCAC
GCCTGTTTCG GACATAACAG CTTTTTTAAA AACAACTACT TATTTAAGAC ATGGACAGAT
GCCAGCTCGA TTATTGACTA CCTTGTTTTT GCCAAAAACT ACATCAGTGA TTGTGAGCAA
AAACATGGCG TAGCACAGGT CGAAAGCGTC ATCGACTCCT GCCATGCACT AATGAACTAT
GGTGTCGATC GCTATAAACG CCCCTCAGAA ATTTCATTCC GAGAAGAACA AGCAAGACAA
AAAGATCGCG AGGCGTACCT TCAAAGCCAA GTGAATGATT TATGGCGCAC CATTCCGACC
CAGCAACATG AACAGTCACA ATCGAAGAAA CGTCGTTTCC CCGCCGAACC GCAGGAAAAT
ATCTTATATT TCATTGAGAA AAATGCCCCT TTACTGGAAC CATGGCAAAG GGAAATTATC
CGCATTGTAC GTAAAATGGC GCAATATTTT TACCCGCAAA AACAAACTCA AGTGATGAAT
GAAGGCTGGG CCACCTTCTG GCACTACACT ATTTTGAATC ACTTGTATGA TGATGGCGTG
GTCACTGACC GCTTCATGAT CGAGTTTTTG CAAAGCCATA CGGGCGTGGT TGCCCAACCC
GACTACAACA GTCGCTATTA CAGTGGCATC AATCCCTATG CTTTAGGCTT TGCGATGTTT
ACTGACATTC GGCGTATTTG TGAAAATCCG ACCGATGAAG ATAAAGCCTG GTTTCCCGAC
ATTGCCGGCA GCAATTGGAT TGAAACCTTA CACTTTGCAA TGCAGAACTT TAAAGACGAA
AGTTTTATTA GCCAATATCT TTCACCTAAA GTCATCCGCC AATTTAAGTT GTTTGGTATC
CATGATAATG AGAAACGCAA TTATCTGTCG GTATCGGCAA TTCATGATGA ACAAGGTTAT
CAAGATATTC GCCAGTTATT ATCGCAGCAA TATAACTTGT CGAATATTGA GCCGAATATC
CAAGTGCATA ATGTAGAGAT CAACGGTGAT AGATCCTTAA CCTTACGTTA TGTGCCGAAT
AACGATATTC CCTTAGCCAG CAGCCATAAA GAAGTATTAA AGCATTTACA TAGATTATGG
GGTTTCACTG TCACCTTAGA GCAAAAAAAT GAGGATGCGA GTGTAACAGT ATTAGCATCC
TGCCCTGAAG CGGCTAAACC AGAATAA
|
|---|
| Protein sequence | MGITKSTPWT PLSDGPDWSF ELLQDYLKEI ERVAALYKLS TYPNQIEVIT AEQMMDAYAG
IGMPIGYTHW SFGKRFIETE QGYKRGQMGL AYEIVINSNP CIAYLMEENT ITMQALVIAH
ACFGHNSFFK NNYLFKTWTD ASSIIDYLVF AKNYISDCEQ KHGVAQVESV IDSCHALMNY
GVDRYKRPSE ISFREEQARQ KDREAYLQSQ VNDLWRTIPT QQHEQSQSKK RRFPAEPQEN
ILYFIEKNAP LLEPWQREII RIVRKMAQYF YPQKQTQVMN EGWATFWHYT ILNHLYDDGV
VTDRFMIEFL QSHTGVVAQP DYNSRYYSGI NPYALGFAMF TDIRRICENP TDEDKAWFPD
IAGSNWIETL HFAMQNFKDE SFISQYLSPK VIRQFKLFGI HDNEKRNYLS VSAIHDEQGY
QDIRQLLSQQ YNLSNIEPNI QVHNVEINGD RSLTLRYVPN NDIPLASSHK EVLKHLHRLW
GFTVTLEQKN EDASVTVLAS CPEAAKPE
|
|---|
| |