Gene Sbal223_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2428 
Symbol 
ID7089391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2901379 
End bp2903052 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content46% 
IMG OID643461322 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_002358346 
Protein GI217973595 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0268357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.181613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCAGC CTTGGATTAA TCATTTGCCA AAAGATGTGC CTGCTGAAAT TAATGTGGAG 
CAGTACTCAT CGCTTGTTGA TATGTTCGAA ACAGCGGTGG CTAAGTATGA AGACCAACCT
GCATTTATCA ACATGGGTGC CACGCTAACC TATCGTAAAT TGGAAGAACG CAGCCGTGCA
TTCGCCGCGT ATCTACAAAA TGAATTAAAG CTTGAAAAGG GCGATCGTGT CGCCTTGATG
ATGCCAAATC TGTTGCAATA CCCGATTGCA CTGTTTGGTG TTTTACGTGC CGGTATGGTG
GTCGTTAATG TTAACCCACT ATATACCCCG CGCGAACTTA AACATCAGTT GATTGACTCG
GGCGCCAAAG CCATAGTTGT AGTGTCAAAC TTCGCCCGCA CCTTAGAAGA AGTTGTCGAA
CAAACGCCCG TTGAAAGCGT CATTATCACC AGTTTAGGTG ATCAATTAAG TGCGCCAAAA
CGCACCTTAG TGAACTTTGT GGTGAAGTAC ATTAAGAAGC TCGTCCCTAA ATACGACTTA
CCCCACGCTC TATCGATGCG CGACACCTTA TCAACCGGTC GTCGCATGCA ATACATCAAG
CCTGAAGTCA CTAACGACGA TTTAGCGTTT TTGCAATATA CAGGTGGCAC AACTGGGGTG
TCTAAAGGCG CGATGTTGAC CCATGGCAAT ATTGTCGCCA ACGTTTTGCA GGCCGATGGC
GCTTATTCGC CCGCCTTAAA CGATGGCAGC GAGTTTGTGG TAACGGCCTT GCCGCTGTAT
CACATCTTCG CCTTGACAGT GAATTGCCTG CTGTTTTTGC ACAAAGGCAG CCAGAACTTA
CTCATCACCA ATCCTCGTGA TATCCCAGGA TTTGTGGCCG AGTTGAAAAA GTATCCTTTC
ACTGCATTGA CCGGGGTAAA CACCTTGTTT AACGCGTTAG TGAACAGTGA TGATTTTTCC
CAGTTGGATT TTTCGCGCTT AAAACTCTCT ATCGGTGGCG GCATGGCGGT ACAAAAAGCC
GTCGCGGATA AATGGCAAGC TATCACTAAG ACCCGTTTAC TCGAAGGTTA TGGTCTGACC
GAAGCCTCAC CTTTATTAAC CTGTTGTCCA TATAATTTAG ATGGTTACAA CGGTTCAATT
GGTTTCCCTG CACCTTCGAC ACTCATTCAA ATCCGTGACG ATGACGGCAA GGTATTAGCC
CAAGGCGAAA CCGGTGAGCT GTTTGGTAAG GGCCCGCAAG TGATGAAAGG CTATTGGCAA
CGTCCTGAAG AAACTGCCAA AGTGATTGAT ACCGACGGCT GGTTAGCCAC GGGCGATATT
GGTTACATGG ATGAGAAAGG TTTCTTCTAT ATTGTCGATC GTAAGAAAGA CATGATCTTA
GTTTCAGGCT TTAACGTATT CCCTAATGAA GTCGAAGAAG TGGTCGCACT GCATCCTAAA
GTGATTGAAG TGGCCGCTGT TGGTGTGCCA AACGACGCCA GTGGTGAGTT AGTGAAGGTA
TTTGTGGTGG CAAAAGATAA ATCTTTAACC GCTGAAGACA TCATTAAGCA CTGCCGTATT
CATTTAACGG GATATAAAGT ACCGAAGCTG GTAGAATTTA GGGACGAGTT ACCTAAAACC
AACGTGGGTA AAATCTTGCG ACGAGAGCTT AGAGACGAAG CTAAGCGCGC GTAA
 
Protein sequence
MDQPWINHLP KDVPAEINVE QYSSLVDMFE TAVAKYEDQP AFINMGATLT YRKLEERSRA 
FAAYLQNELK LEKGDRVALM MPNLLQYPIA LFGVLRAGMV VVNVNPLYTP RELKHQLIDS
GAKAIVVVSN FARTLEEVVE QTPVESVIIT SLGDQLSAPK RTLVNFVVKY IKKLVPKYDL
PHALSMRDTL STGRRMQYIK PEVTNDDLAF LQYTGGTTGV SKGAMLTHGN IVANVLQADG
AYSPALNDGS EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPG FVAELKKYPF
TALTGVNTLF NALVNSDDFS QLDFSRLKLS IGGGMAVQKA VADKWQAITK TRLLEGYGLT
EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ IRDDDGKVLA QGETGELFGK GPQVMKGYWQ
RPEETAKVID TDGWLATGDI GYMDEKGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK
VIEVAAVGVP NDASGELVKV FVVAKDKSLT AEDIIKHCRI HLTGYKVPKL VEFRDELPKT
NVGKILRREL RDEAKRA