Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2428 |
Symbol | |
ID | 7089391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2901379 |
End bp | 2903052 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643461322 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_002358346 |
Protein GI | 217973595 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0268357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.181613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATCAGC CTTGGATTAA TCATTTGCCA AAAGATGTGC CTGCTGAAAT TAATGTGGAG CAGTACTCAT CGCTTGTTGA TATGTTCGAA ACAGCGGTGG CTAAGTATGA AGACCAACCT GCATTTATCA ACATGGGTGC CACGCTAACC TATCGTAAAT TGGAAGAACG CAGCCGTGCA TTCGCCGCGT ATCTACAAAA TGAATTAAAG CTTGAAAAGG GCGATCGTGT CGCCTTGATG ATGCCAAATC TGTTGCAATA CCCGATTGCA CTGTTTGGTG TTTTACGTGC CGGTATGGTG GTCGTTAATG TTAACCCACT ATATACCCCG CGCGAACTTA AACATCAGTT GATTGACTCG GGCGCCAAAG CCATAGTTGT AGTGTCAAAC TTCGCCCGCA CCTTAGAAGA AGTTGTCGAA CAAACGCCCG TTGAAAGCGT CATTATCACC AGTTTAGGTG ATCAATTAAG TGCGCCAAAA CGCACCTTAG TGAACTTTGT GGTGAAGTAC ATTAAGAAGC TCGTCCCTAA ATACGACTTA CCCCACGCTC TATCGATGCG CGACACCTTA TCAACCGGTC GTCGCATGCA ATACATCAAG CCTGAAGTCA CTAACGACGA TTTAGCGTTT TTGCAATATA CAGGTGGCAC AACTGGGGTG TCTAAAGGCG CGATGTTGAC CCATGGCAAT ATTGTCGCCA ACGTTTTGCA GGCCGATGGC GCTTATTCGC CCGCCTTAAA CGATGGCAGC GAGTTTGTGG TAACGGCCTT GCCGCTGTAT CACATCTTCG CCTTGACAGT GAATTGCCTG CTGTTTTTGC ACAAAGGCAG CCAGAACTTA CTCATCACCA ATCCTCGTGA TATCCCAGGA TTTGTGGCCG AGTTGAAAAA GTATCCTTTC ACTGCATTGA CCGGGGTAAA CACCTTGTTT AACGCGTTAG TGAACAGTGA TGATTTTTCC CAGTTGGATT TTTCGCGCTT AAAACTCTCT ATCGGTGGCG GCATGGCGGT ACAAAAAGCC GTCGCGGATA AATGGCAAGC TATCACTAAG ACCCGTTTAC TCGAAGGTTA TGGTCTGACC GAAGCCTCAC CTTTATTAAC CTGTTGTCCA TATAATTTAG ATGGTTACAA CGGTTCAATT GGTTTCCCTG CACCTTCGAC ACTCATTCAA ATCCGTGACG ATGACGGCAA GGTATTAGCC CAAGGCGAAA CCGGTGAGCT GTTTGGTAAG GGCCCGCAAG TGATGAAAGG CTATTGGCAA CGTCCTGAAG AAACTGCCAA AGTGATTGAT ACCGACGGCT GGTTAGCCAC GGGCGATATT GGTTACATGG ATGAGAAAGG TTTCTTCTAT ATTGTCGATC GTAAGAAAGA CATGATCTTA GTTTCAGGCT TTAACGTATT CCCTAATGAA GTCGAAGAAG TGGTCGCACT GCATCCTAAA GTGATTGAAG TGGCCGCTGT TGGTGTGCCA AACGACGCCA GTGGTGAGTT AGTGAAGGTA TTTGTGGTGG CAAAAGATAA ATCTTTAACC GCTGAAGACA TCATTAAGCA CTGCCGTATT CATTTAACGG GATATAAAGT ACCGAAGCTG GTAGAATTTA GGGACGAGTT ACCTAAAACC AACGTGGGTA AAATCTTGCG ACGAGAGCTT AGAGACGAAG CTAAGCGCGC GTAA
|
Protein sequence | MDQPWINHLP KDVPAEINVE QYSSLVDMFE TAVAKYEDQP AFINMGATLT YRKLEERSRA FAAYLQNELK LEKGDRVALM MPNLLQYPIA LFGVLRAGMV VVNVNPLYTP RELKHQLIDS GAKAIVVVSN FARTLEEVVE QTPVESVIIT SLGDQLSAPK RTLVNFVVKY IKKLVPKYDL PHALSMRDTL STGRRMQYIK PEVTNDDLAF LQYTGGTTGV SKGAMLTHGN IVANVLQADG AYSPALNDGS EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPG FVAELKKYPF TALTGVNTLF NALVNSDDFS QLDFSRLKLS IGGGMAVQKA VADKWQAITK TRLLEGYGLT EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ IRDDDGKVLA QGETGELFGK GPQVMKGYWQ RPEETAKVID TDGWLATGDI GYMDEKGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK VIEVAAVGVP NDASGELVKV FVVAKDKSLT AEDIIKHCRI HLTGYKVPKL VEFRDELPKT NVGKILRREL RDEAKRA
|
| |