Gene Sbal223_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2427 
Symbol 
ID7089390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2900199 
End bp2901308 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content45% 
IMG OID643461321 
Productribonuclease D 
Protein accessionYP_002358345 
Protein GI217973594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000162598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.100948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAGCGT TTCAATATGT GAGTGATGAA GCAAGCCTTA ATGCCCTCGT TGCCCAATAT 
AAACAGAGTA AGATACTCGT GTTAGATACC GAGTTTGTTC GTACTCGTAC TTATTATGCC
AAGTTAGGTT TGATACAAGC TTATGATGGT AAAACCTTAG CTTTGATTGA TCCTGTGGCT
TTACCTGATT TAGCCCAGTT TTGGGCGCTG TTATCGGACC CGAATATCAT TAAGTTAGTG
CATTCCTGCA GTGAAGACTT AGAAGTGTTT GCCCATTATG GTAAATGTCA GCCTACGCCT
TTGTTTGATA GCCAAATTGC AGCTTCTTTG TGTGGAATGG GCCATGGTGT AGGTTATGCA
AAGTTAGTTG AAACTTGCCT TGGTGAAGTG ATCGATAAAG GTGAGTCACG TACCGATTGG
ATCCGCCGCC CTTTAACGGA AGCACAGTTA AGCTACGCCG CGAATGACGT CTTGTACTTG
TATCAGCTCT ATCCTCAACT TGAAGCGAAA CTCAGCGCCC AAGGGCGTTT AGCTTGGTTA
TACGAGGAAG GGGAAAGGAT GACCCAGGGC AGGCTTGCCG ATCCTGATCT CGACACGGCT
TATTTGAAAG TGAAAAATGC TTTCCAACTG ACTGAAATCC AATTGGCTTA CCTTAAAGTG
CTTGCTAAGT GGCGTCTTGA AAAAGCTTTA GTGCGTGATT TAGCTCTAGG TTTTGTGGTC
AAAGATCATG GTCTTATCGC ATTAGCGAAG AAGCAACCTA AATCCTCGGC CGACTTGTTT
AAGCTCAATG ATTTGACTGA GCAAGAAAAA CGTATCCACG GAAAAGATTT ATTACGTGTG
CTGCAAACCG CTGATTTGGT CAATTTACCC GAATTAGTGG ATGTGTTGGC GTTAAAATCA
GGCTACAAAT CGGCCTTTAA GGCGATTAAA AGCTGCTTAG TCGAGTTGTG CGAACAGCAT
GATGTGCCGC AGGAAATGCT CGGTTCTAAA CGTCATATCC ATGAGTTTTT GCAATGGCGT
TGGGATAAGC AACAAGGGGA TTTGCCTGCG GTGTTATGCG GATGGCGGGG CGAGATTGCC
GCTGAGTCCC TAGCTAAGCT TGAGGTCTAA
 
Protein sequence
MSAFQYVSDE ASLNALVAQY KQSKILVLDT EFVRTRTYYA KLGLIQAYDG KTLALIDPVA 
LPDLAQFWAL LSDPNIIKLV HSCSEDLEVF AHYGKCQPTP LFDSQIAASL CGMGHGVGYA
KLVETCLGEV IDKGESRTDW IRRPLTEAQL SYAANDVLYL YQLYPQLEAK LSAQGRLAWL
YEEGERMTQG RLADPDLDTA YLKVKNAFQL TEIQLAYLKV LAKWRLEKAL VRDLALGFVV
KDHGLIALAK KQPKSSADLF KLNDLTEQEK RIHGKDLLRV LQTADLVNLP ELVDVLALKS
GYKSAFKAIK SCLVELCEQH DVPQEMLGSK RHIHEFLQWR WDKQQGDLPA VLCGWRGEIA
AESLAKLEV