| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2201 |
|---|
| Symbol | |
|---|
| ID | 7086007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2613902 |
|---|
| End bp | 2614561 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643461100 |
|---|
| Product | protein of unknown function UPF0005 |
|---|
| Protein accession | YP_002358124 |
|---|
| Protein GI | 217973373 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000806989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.147893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAG AAACCTTATA TTCGACAAGT GCGTCAACAC TGGAAGTGAA CAAACTTCTT
AAAAACACTT ATATGCTGTT GTCTATGACA TTGGCCTTCT CTGCCCTGTG CGCTGGCTTG
GCAATGGCAT TAAATATCAG TCCATTAGTC TCCATTGGCT TGTCCATTGG TGGCCTAGTG
CTGTTGTTTG TGACCTTACG TAAAGCCGAG TCTGCAGCGG GTATCTTCTG GGTATTTGCC
TTTACTGGTA TGGAAGGCGC GTCACTGGGC TACATGCTGA ATCACTACGC TGGTATGGCA
AACGGTCCAC AGCTGATCAT GCAAGCACTG GGGTTAACGT CAGTGATTTT CGTTGCCTTA
TCAGCCTATG CGGTGACCAC GAAGAAAGAT TTCTCTTTCC TACGTGGGTT CTTGTTCGCT
GGCTTGATTG TGGTGATTGC CGCTGCCGTA ATTAACATCT TTATGGGTAA CAGCATTGCC
TTTATGGCGA TTAACGCCGG TATTGCATTA TTGATGACAG GTTTTATCCT GTTTGATACT
AGCCGTATTG TGAACGGCGG CGAGACGAAC TACATTCGCG CAACTATCTC ATTATACTTA
GATTTCTTAA ACCTCTTCAT CGCCCTGTTG CACCTTATGG GCATAGGCAA CGATGACTAA
|
|---|
| Protein sequence | MTQETLYSTS ASTLEVNKLL KNTYMLLSMT LAFSALCAGL AMALNISPLV SIGLSIGGLV
LLFVTLRKAE SAAGIFWVFA FTGMEGASLG YMLNHYAGMA NGPQLIMQAL GLTSVIFVAL
SAYAVTTKKD FSFLRGFLFA GLIVVIAAAV INIFMGNSIA FMAINAGIAL LMTGFILFDT
SRIVNGGETN YIRATISLYL DFLNLFIALL HLMGIGNDD
|
|---|
| |