| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2184 |
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| Symbol | |
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| ID | 7085990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2598895 |
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| End bp | 2600823 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461083 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_002358107 |
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| Protein GI | 217973356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00110297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0619303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTAA TTACACTTCC CGATGGTAGC AAACGCGAGT TTGCTCATGC TGTATCGACT
CTCGATGTTG CCGCCGATAT TGGCCCAGGT TTAGCGAAAG CTTGTATCGC TGGCCGTGTT
AATGGCGAAT TAAAAGATGC TTGCGATCTC ATTGAAACCG ATGCAGAGCT ATCAATCATT
ACCGCCAAAG ACGAAGAAGG TGTTGAAATT CTTCGCCATT CTTGCGCACA TTTATTAGGT
CACGCGATTA AGCAAATGTG GCCAGAAACC AAGATGGCGA TTGGTCCAGT TATCGATAAC
GGCTTCTACT ATGATATCGA CCTTGAGCAC AAGCTGACTC AAGATGACAT CGATGCCTTA
GAAAAGCGCA TGCTTCAACT GGCCAAAACT AACTATGACG TAGTAAAACG TGTGGTTAGC
TGGCAAGAAG CGCGCGATAC ATTCGCGGCG CGTGGCGAAG ATTATAAGAT TGCCATTCTG
GATGAAAACA TCAGCAAAGA CGCGACGCCT GCGCTGTATC ATCATGAAGA ATACACTGAT
ATGTGTCGTG GACCGCACGT ACCTAACATG CGTTTCTGCC AACATTTCAA ATTAATGAGC
ATTGCTGGCG CTTATTGGCG TGGCAACTCA GAAAACAAGA TGTTGCAACG TATCTATGGT
ACAGCTTGGG CTGACAAAAA AGCCTTGAGC ACACACTTAA CCCGTCTTGA AGAAGCGGCT
AAGCGTGACC ACCGTAAAAT CGGTAAGCAG CTCGACTTGT ATCACATGCA AGAAGAAGCA
CCGGGTATGG TGTTCTGGCA CAACGACGGT TGGAGCATCT TCCTCGAATT AGAAAGATTC
ATTCGCCGTA AGTTAAACCA GTACACTTAC CAAGAAGTTA AAGGCCCATT AATGATGGAC
CGCGTGCTAT GGGAACGTTC TGGTCACTGG GATAAATACT CAGAAGCCAT GTTCACGACC
AGCAGCGAAA ACCGCGAATA TGCTATCAAG CCAATGAACT GCCCAGGCCA TGTGCAGATC
TTCAACCAAG GGTTGAAATC TTACCGCGAC CTGCCATTAC GTATGGCTGA ATTTGGTTGC
TGTCACCGTA ATGAACCTTC TGGTTCGTTG CACGGATTAA TGCGCGTACG TGGTTTTACC
CAAGATGACG CTCATATTTT CTGTACTGAC AGCCAAGTTC AAGAGGAAGT GAGTGCTTGT
ATCCAGATGG TTTACGATAC ATACGCCACC TTCGGCTTTG AAAATATCGT GGTGAAACTG
TCGACTCGCC CAGAAAAACG TATCGGTGAC GATGCGATGT GGGACAGAGC GGAAGAAGCG
CTTAAGCAAG CTCTGCGTGA CAATAATATT GAATTCACCA TTTTGCCAGG TGAAGGCGCC
TTCTACGGAC CAAAAATCGA ATTTACTTTA CACGATTGTT TGGACCGTGC GTGGCAATGT
GGTACTGTGC AGCTCGATTA TGCGTTGCCA AGCCGTCTTG GTGCAACTTA CGTTGCCGAA
GATAATAGCC GTCAGACCCC AGTGATGATC CATCGTGCCA TTTTAGGCTC TTTGGAACGA
TTCTTGGGTA TCTTGATAGA AGAATATGCA GGACGTTTCC CAACTTGGTT AGCCCCAATG
CAAGTTGTCG TGATGAATAT CACTGATAAA CAGGCTGATT ATGTTGAAGA AGTCGTAAAA
TTCTTCAAAG AACAAGGTAT TCGAGCGTCT TTTGACTTGA GGAATGAGAA AATAGGCTTT
AAAATACGCG AACACACCTT AAGGCGTGTC CCTTATTTGT TGGTCGTTGG CGATCAAGAA
ATGGAAAATA AGGAAGTAGC GGTGCGTACC CGTGATGGTA TCGATTTAGG TAAGATGCGA
CTTGAAGATT TCGCCACTAA AATCCATCAA CAGATTTCGC TCCGTAGTCT CAAATTGTTG
GAGGAATAG
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| Protein sequence | MPVITLPDGS KREFAHAVST LDVAADIGPG LAKACIAGRV NGELKDACDL IETDAELSII
TAKDEEGVEI LRHSCAHLLG HAIKQMWPET KMAIGPVIDN GFYYDIDLEH KLTQDDIDAL
EKRMLQLAKT NYDVVKRVVS WQEARDTFAA RGEDYKIAIL DENISKDATP ALYHHEEYTD
MCRGPHVPNM RFCQHFKLMS IAGAYWRGNS ENKMLQRIYG TAWADKKALS THLTRLEEAA
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WSIFLELERF IRRKLNQYTY QEVKGPLMMD
RVLWERSGHW DKYSEAMFTT SSENREYAIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTD SQVQEEVSAC IQMVYDTYAT FGFENIVVKL
STRPEKRIGD DAMWDRAEEA LKQALRDNNI EFTILPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDYALP SRLGATYVAE DNSRQTPVMI HRAILGSLER FLGILIEEYA GRFPTWLAPM
QVVVMNITDK QADYVEEVVK FFKEQGIRAS FDLRNEKIGF KIREHTLRRV PYLLVVGDQE
MENKEVAVRT RDGIDLGKMR LEDFATKIHQ QISLRSLKLL EE
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