| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2155 |
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| Symbol | |
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| ID | 7085961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2560442 |
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| End bp | 2561857 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643461056 |
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| Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
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| Protein accession | YP_002358080 |
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| Protein GI | 217973329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00011339 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.022313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCTC ATAAACTTTC GGTCATTGAG AAGATCGGTT ACGGCTCTGG GGATATGGCT
GTAAACGTGG TGATGTCTTC AATGATGTTA ATTATTACCT TCTTTTATAC CGACATCTTT
GGCCTAAAGC CTGCTGATGT GGGGATTTTG TTTTTACTGG TTCGCTTGAT TGATGCCATT
ACCGATCCAC TCATGGGCAT TATTAACGAT AAAGTAACCA CACGTTGGGG TCGTTATCGC
CCTTACTTCC TGTTTATGGC GGTGCCGTTT GGGCTGTCGG TCTTTTTAAC CTTTAGTACA
CCGGACTGGG ACTATAACGC CAAACTGATT TGGGCTTATT CCACTTATAT TCTGGTGACG
ATTATTTTCA CTACAGTCAC TATTCCTTAT ATATCCATTA TTAGTGTACT AACAGACAAC
CCCAAAGAGC GCTTATCCGC CAATGGCTAT CGACTGTTCT TCGCTAAAAT AGCCGCTTTT
TTAGTGACCA TTATTGTGCC TATGCTGGCC GCATCTTGGG GCGGTGATAA CCTTGCTGCT
GGCTATCAAA AGGCCATGGG TGTAATGGCA TTAATGGCAA CATTGTTGTT TTTATTCTGT
TTCTTCACGA CTAAAGAGCG TGTGGCCTAC AAAGTAGAAA CTAAGCCTAT TGGCACACAA
TTGAAGTTGC TATTAAAGAA CGATCAATGG TTAGTGCTGT GTTCTATCTG CGTGATAGGC
ACTGTCGGTT ACGTTATTCG CGGCTCAGTT GCCGCCTATT ACGCGACATA TTATCTCGGT
GGCGACGCCA AAATGCTGTC GGCATTTCTC TCAACCGGTG TTGGCGCCGC GATTCTGGCG
ATGGTGGCCT CAACCTGGAT CACTAAGCGT TACTGTAAGC TTAAGCTGTT CCGCTATAGC
CAACTCATCG TTGGTATTTT AAGTGTACTG ATGTTCTTTA CCGTGCAGCC AGGCGATATC
GTACTTGCCT TTGTGCTCTA TTTTGCCATC TCCTTTGTGG TGGATTTACA TGCTCCTGTC
TTTTGGTCAG TGATTTCTGA ATCGGTCGAT TACGGCACGG TTAAAACAGG TCATAGGGTT
TCGGGTTTAG CTTTTGGTGG GATCTCATTC GCTCAAAAAG CCGGTATGGG CGCCGCGGGT
TTTGTGGTGG GTATGTTATT GACTTACTTC AACTATCAAC CTGGGCAAGT ACAAAGCAGT
TTCACCCTGA CAGGGATTTC CTTGATGTTA ACTGTCATTC CTGGTGCCTT CCACGCGCTG
ATGGGATTGT TGATGTTTAA GTACAAAATA TCTGACCGTG TTTATGAAGA TATCAAGCAA
GCCCTACCCG ATATGGAAAT TCTTGATGAA GATGCCGCAC CTGAGTCTAA GCAAACAACT
CAAGGCGGTA ATTCAGATCC GCAAGTATCA GTTTAA
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| Protein sequence | MSSHKLSVIE KIGYGSGDMA VNVVMSSMML IITFFYTDIF GLKPADVGIL FLLVRLIDAI
TDPLMGIIND KVTTRWGRYR PYFLFMAVPF GLSVFLTFST PDWDYNAKLI WAYSTYILVT
IIFTTVTIPY ISIISVLTDN PKERLSANGY RLFFAKIAAF LVTIIVPMLA ASWGGDNLAA
GYQKAMGVMA LMATLLFLFC FFTTKERVAY KVETKPIGTQ LKLLLKNDQW LVLCSICVIG
TVGYVIRGSV AAYYATYYLG GDAKMLSAFL STGVGAAILA MVASTWITKR YCKLKLFRYS
QLIVGILSVL MFFTVQPGDI VLAFVLYFAI SFVVDLHAPV FWSVISESVD YGTVKTGHRV
SGLAFGGISF AQKAGMGAAG FVVGMLLTYF NYQPGQVQSS FTLTGISLML TVIPGAFHAL
MGLLMFKYKI SDRVYEDIKQ ALPDMEILDE DAAPESKQTT QGGNSDPQVS V
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