| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2154 |
|---|
| Symbol | |
|---|
| ID | 7085960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2559399 |
|---|
| End bp | 2560346 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643461055 |
|---|
| Product | Alpha-N-arabinofuranosidase |
|---|
| Protein accession | YP_002358079 |
|---|
| Protein GI | 217973328 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3940] Predicted beta-xylosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0709531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0185421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAGC TTATCCCTTT AATTGAACAA CGTGCCGACC CTTTTATTTA TAAGCACACG
GATGGTTTTT ATTATTTCAC CGCGTCAGTG CCTCAGTACG ACCGTATTGA GTTACGCAGA
GCCACCACGA TTGCTGGTCT TGCCGATACC ACTCCGGTTG ATGTGTGGCA TAAACCGGAT
ACGGGGGCTT ATTCTGACTT GGTGTGGGCG CCGGAAATCC ATTTTAATCA AGGTGCTTGG
TATCTCTATG TTGCAATTGC GCCGAGCCGA GAAATTAAAG ATGCGCTGTT TCAACATCGC
ATGTATGTGC TGCGTTGTAA TGATGCCAAC CCACTGACGG GCGAATGGCA ATTCCTTGGT
CAGCTCGATA CCGGTATCGA CACTTTCTGC CTTGATGCGA CAACCTTTGA ACACTGTGGT
CAGCTGTACT ATGTGTGGGC GCAAAAAGCC CCGGACATTC AAGGCAATAG CAATCTTTAC
ATTGCCAAAA TGGACACTCC AGACAAGATA AGCTCAACGC CTGTTATGTT AACCAAGCCT
GAATATCCAT GGGAGATCAA AGGCTTTTGG GTGAACGAAG GTCCGTCCGT GCTAAAACGT
CATGGCAAAA TCTTTATCAC CTATTCTGCC AGTGCTACCG ATGAAAATTA TTGCATGGGT
TTACTGTCTA TTGATGCGAA TGCCGATTTA CTCGATGCTA CTCAATGGCA TAAAGCATCA
GAACCTGTGA TGACAAGTTG TTATGAGCAC GGTGTTTATG GTGCGGGACA TAACAGTTTT
ACCTTAGCTG AAGATGGTGA AACCGATCTA CTGGTGTACC ACGCGCGCAC TTACACTGAA
ATTGAAGGTG ACCCTTTATG GGATCCCAAC CGCCATACCT ATGTTAAGGC ATTGCGGTGG
GATGATGCGG GTATGCCAGT ATTTGGCAAG CCTTCAATCC AGGAATAA
|
|---|
| Protein sequence | MLKLIPLIEQ RADPFIYKHT DGFYYFTASV PQYDRIELRR ATTIAGLADT TPVDVWHKPD
TGAYSDLVWA PEIHFNQGAW YLYVAIAPSR EIKDALFQHR MYVLRCNDAN PLTGEWQFLG
QLDTGIDTFC LDATTFEHCG QLYYVWAQKA PDIQGNSNLY IAKMDTPDKI SSTPVMLTKP
EYPWEIKGFW VNEGPSVLKR HGKIFITYSA SATDENYCMG LLSIDANADL LDATQWHKAS
EPVMTSCYEH GVYGAGHNSF TLAEDGETDL LVYHARTYTE IEGDPLWDPN RHTYVKALRW
DDAGMPVFGK PSIQE
|
|---|
| |