| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2148 |
|---|
| Symbol | |
|---|
| ID | 7085954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2551657 |
|---|
| End bp | 2553156 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643461050 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002358074 |
|---|
| Protein GI | 217973323 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.123365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.259949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTA TCTTAGAACT GCAAAATATC AGTAAGCATT ACCCCGGCGT GAAAGCGCTA
GAAGAAGTGA ACTTACGTTT ATATTCAGGG GAAGTTCATG CCCTCTTGGG CGAAAACGGT
GCGGGTAAGT CCACACTAGT GAAAGTGATG ACAGGGGCAC AATCCAAAGA TGGCGGGGAT
ATTGTTTTTC TGGGTGAAAA ACAACATTTT TGTACGCCGA TTGAGGCGCA GAAAATCGGG
ATCAGCACGG TTTATCAAGA AGTGAATCTT GTTCCGAATC TTTCCGTGGC GCAGAATTTA
TTTCTGGGCT ACGAGCCTAA ACGTTTTGGA TTAATTCATT TTAATAAAAT GTATGCCGAT
GCCCGCTGCG TGTTGACTCA ATTCAAGCTG GATATTGATG TCACTGCGCC ACTGTCGCAA
TACTCTATAG CCGTACAACA GCTTATCGCC ATTGCCCGTG GCGTAGCCAT GTCAGCCAAA
GTGTTGGTAT TAGATGAGCC AACGGCCAGC CTTGATGTGG ATGAAGTGCA AGTGCTGTTT
GGCATTTTGA ATCAGCTTAA GCAAAAGGGT GTGGCCATAG TGTTTATCAC CCATTTTCTC
GATCAAGTTT ACCAGATAAG TGACCGCATC ACGGTACTGC GAAACGGTCG CTTTATTGGT
GAATATCTTA CATCTGAGTT ACCCCAATCC CAATTGATTG AAGCTATGCT CGGGCGTTCA
TTGCAAGAGC AACTGGTTGA TAAGAAAACT GACAATAATT CAGAAAAAAA CACTTCAGCT
GTACTTCTTT CCCTTGAGGG CGTGTCAGTT AAAGGCTCCA TTCAAGCCAT GACGCTCACT
GTGCCTAAGG GTCAGGCTGT GGGTCTTGCT GGCTTGTTAG GTTCAGGGCG CAGTGAAGTT
TGCAATGCGG TTTTTGGACT GGATTTGCTT GAAAGCGGCA GCATTCACTT AGCGGGTAAA
AAACTGAATC TTTCACAACC TGTGGATGCC ATTCACGCGG GGATCGCACT TTGTCCTGAA
GATCGCAAGA TTGACGGCAT TATTGGGCCT TTATCCATTC GCGAGAACAT CATTTTAGCC
TTGCAGGCGA GGGTAGGATG GTGGCGCTGT TTGTCAAAGG CAAGGCAACA GGAAATTGCC
CAGTTCTTTA TCGATAAATT GCAGATCGCC ACGCCCGATG CAGACAAACC CATAGAGCAG
CTCAGTGGCG GTAATCAGCA GAAAGTGATC TTAGCTCGCT GGCTTGCCAT CGAACCGATT
TTGTTAGTGC TCGATGAACC AACCCGCGGT ATCGATATCG GCGCCCATGC CGAAATAATC
AAACTGATTA GGTCCTTGTG TGACGATGGT ATGTCACTGC TCGTTGCCTC CTCCGAATTA
GATGAACTTG TCGCATTCTC CAACAAAGTC GTGGTGATGC GCGACCGTTA TGCGGTGCGT
GAATTAACGG GTTCAGATCT CACCTCACAA CACGTTATGC AAGCCATTGC GGAGGGATAA
|
|---|
| Protein sequence | MSLILELQNI SKHYPGVKAL EEVNLRLYSG EVHALLGENG AGKSTLVKVM TGAQSKDGGD
IVFLGEKQHF CTPIEAQKIG ISTVYQEVNL VPNLSVAQNL FLGYEPKRFG LIHFNKMYAD
ARCVLTQFKL DIDVTAPLSQ YSIAVQQLIA IARGVAMSAK VLVLDEPTAS LDVDEVQVLF
GILNQLKQKG VAIVFITHFL DQVYQISDRI TVLRNGRFIG EYLTSELPQS QLIEAMLGRS
LQEQLVDKKT DNNSEKNTSA VLLSLEGVSV KGSIQAMTLT VPKGQAVGLA GLLGSGRSEV
CNAVFGLDLL ESGSIHLAGK KLNLSQPVDA IHAGIALCPE DRKIDGIIGP LSIRENIILA
LQARVGWWRC LSKARQQEIA QFFIDKLQIA TPDADKPIEQ LSGGNQQKVI LARWLAIEPI
LLVLDEPTRG IDIGAHAEII KLIRSLCDDG MSLLVASSEL DELVAFSNKV VVMRDRYAVR
ELTGSDLTSQ HVMQAIAEG
|
|---|
| |