| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2139 |
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| Symbol | araD |
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| ID | 7085945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2541615 |
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| End bp | 2542322 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461041 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_002358065 |
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| Protein GI | 217973314 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.132093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.896628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTC TTGAACTGAA ACGCGAAGTT TATGAAGCCA ATATGGAGCT TGAGAAGCGC
AATTTAGTGA CTTACACCTT TGGTAATGTG TCGCAAGTTG ATCGCAGGCT CGGTGTAATT
GGCATTAAAC CGAGCGGTGT GCCCTATGAG GATCTCAAGG TCGAAGATAT CGTTATTGTC
GATCTTGAAA ACCAAATTAT CGAAGGGCGT TTACGTCCGT CATCCGACAC CAAAACGCAC
ACTTATTTAT ACCGTCAATG GCAGAGTATT GGCGGCATCA CCCACACACA TTCGACTTAT
GCAACTGCAT GGGCGCAGGC GCAAATCGCC ATTCCTTGTT TGGGTACCAC ACAAGCCGAT
TATGTTTACG GCGAGATCCC ATGCACTGCT GTGATGCGTG ATGACCAAAT CAGTCGCGAT
TACGAAGAAG AAACGGGCGT ACAAATTCTC GATTGCTTTG TTGATAGAAA TCCAGGCGAG
TCACCTATGG TAATCGTTGC GGGGCATGCG CCATTCACTT GGGGAGACAG CGCGGCAAAG
TCGGTTTATC ACGCTGTATT ACTCGAAGAA ATCGCGCGAA TGGCTTATCT GACCAAAACC
TTGTCGCCAA GTATCAAGCC ATTAAAACAA GAGCTTATTG ATAAACATTA CTTACGTAAG
CACGGTAAAG ACGCCTATTA CGGCCAAAAC AGTGTCACTA GTAAATAG
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| Protein sequence | MSFLELKREV YEANMELEKR NLVTYTFGNV SQVDRRLGVI GIKPSGVPYE DLKVEDIVIV
DLENQIIEGR LRPSSDTKTH TYLYRQWQSI GGITHTHSTY ATAWAQAQIA IPCLGTTQAD
YVYGEIPCTA VMRDDQISRD YEEETGVQIL DCFVDRNPGE SPMVIVAGHA PFTWGDSAAK
SVYHAVLLEE IARMAYLTKT LSPSIKPLKQ ELIDKHYLRK HGKDAYYGQN SVTSK
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