Gene Sbal223_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2044 
SymbolruvB 
ID7086878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2416156 
End bp2417160 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content51% 
IMG OID643460947 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_002357971 
Protein GI217973220 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00121057 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000744022 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAGG CAGATAGACT CATCCAGCCG CAGATCCAAG CTCAAGATGA ATCCATCGAC 
AGGGCAATGC GCCCTAAAAT GCTCGATGAA TACACTGGCC AAGATGACAC TCGGGCGCAG
CTTAAGGTGT TTATTCAAGC GGCGAAGAAT CGTAATGAAG CCTTAGACCA TATGTTGATC
TACGGCCCGC CAGGATTGGG TAAAACCACC TTGGCCATGA TTGTGGCGAA CGAGATGGGG
GTAAACATTA AATCCACCTC GGGGCCAGTG CTTGAAAAAG CGGGGGATCT CGCCGCGCTT
CTGACCAATC TTGAATCCGG TGATGTGTTA TTCATCGATG AAATCCATCG ATTAAGCCCT
GTGGTAGAAG AGATTTTGTA TCCGGCGATG GAAGATTATC AGCTGGATAT CATGATAGGT
GAAGGACCTG CGGCGCGTTC TATCAAGCTT GATTTACCGC CGTTCACTCT AGTGGGCGCG
ACAACACGGG CAGGGGCATT AACCTCACCA CTTCGGGCGC GTTTTGGGAT CCCGCTGCGG
CTTGAGTTCT ATAACATCAA AGATTTAAGC ACCATAGTCA CGCGTTCGGC GCAGGTAATG
GAGCTGGATA TTGATGCCGA AGGCGCATTT GAAATCGCAC GCCGTTCACG CGGCACACCG
CGAATAGCCA ACCGATTGCT GCGCCGCGTG CGCGATTACG CGCAGGTGAA GCATGATGGC
GCAGTCACCA AGTTTGTGGC CGAACACGCT TTAGACTTAT TAGATGTGGA TAGTGAAGGT
TTCGATTATA TGGACCGCAA GCTATTACTG GCCATTATTG ACAAGTTTAT GGGCGGACCC
GTTGGGCTAG ATAACTTAGC CGCGGCCATA GGCGAAGAAC GTGAAACCAT CGAAGATGTG
TTAGAACCTT TCTTGATCCA ACAAGGGTTT ATCCAACGTA CGCCCCGCGG CCGAATTGCA
ACCGCACGGG CATACCAGCA TTTTGAGTTG ATCAAACCCG AATAG
 
Protein sequence
MIEADRLIQP QIQAQDESID RAMRPKMLDE YTGQDDTRAQ LKVFIQAAKN RNEALDHMLI 
YGPPGLGKTT LAMIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLESGDVL FIDEIHRLSP
VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGALTSP LRARFGIPLR
LEFYNIKDLS TIVTRSAQVM ELDIDAEGAF EIARRSRGTP RIANRLLRRV RDYAQVKHDG
AVTKFVAEHA LDLLDVDSEG FDYMDRKLLL AIIDKFMGGP VGLDNLAAAI GEERETIEDV
LEPFLIQQGF IQRTPRGRIA TARAYQHFEL IKPE