Gene Sbal223_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2018 
Symbol 
ID7086852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2383816 
End bp2384631 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID643460921 
Producthypothetical protein 
Protein accessionYP_002357945 
Protein GI217973194 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00140757 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00602396 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAATTA GCCAACGTTT ACAACAGATA AACAGCATGA TCAGTGGTCA TTACGATCAT 
ATTTGGGATT GCTGCTGCGA TCATGGTTTA CTCGGTATGC TGTTGCTAGA AAGGAGCGCT
GCCCGCCATG TACACTTTGT CGATTGTGTC CCTTCGCTGA TGCAGGCGCT TGAACTGCGT
TTGCAGCGTT TCTTCCCCGC TGACATATCA GGCCTAAATC CCAACTTAGC GCCACACTCA
GATCCAGACT TAAACCCAGA CATAGACCCA CACTTAAACC TAGGCATAGA CCCAAATTTA
AGTTGTCATA CTCAGTGGCA AGTGCATTGC CTTGATGTTG CGGCTTTACC GCTCGCGCAA
ACCAGTGACA AGGATAAACA GTTGATCATC ATCGCTGGTG TGGGTGGTGA ACTGCTGGTG
GACTTAGTGA AGGCAATTCT AGCCCAATAC CCACAGCGGC ACCTCGAATT TATTTTGTGT
CCCGTGCATC ATAATTATTA TGTCAGGCAA TCACTCACTG CCTTAGGGCT AGGGCTTAAG
TCAGAACACT TATTGGAAGA GAATCAACGT TTCTACGAAA TCCTCCATGT CAGTACAATC
GCGGCTCCAA ATGGTCTGCT TATCAGTGCT ACGGGTTCGT TAATGTGGCA GACGTTAGAT
GAAACAAGTT TGCCGCGAGC GCAGCGTTAT CTGTCGCAGG TGATTGGTCA TTACCTACGC
ATGCCCACGC ATAAGCAAAC ACCAGAGATT ATTGATGCCT ATCAGCAGCA ATTGGCCCAG
CTCTTAAGTG AGCATAGTGA GTTTGAATGC TCTTGA
 
Protein sequence
MKISQRLQQI NSMISGHYDH IWDCCCDHGL LGMLLLERSA ARHVHFVDCV PSLMQALELR 
LQRFFPADIS GLNPNLAPHS DPDLNPDIDP HLNLGIDPNL SCHTQWQVHC LDVAALPLAQ
TSDKDKQLII IAGVGGELLV DLVKAILAQY PQRHLEFILC PVHHNYYVRQ SLTALGLGLK
SEHLLEENQR FYEILHVSTI AAPNGLLISA TGSLMWQTLD ETSLPRAQRY LSQVIGHYLR
MPTHKQTPEI IDAYQQQLAQ LLSEHSEFEC S