Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2018 |
Symbol | |
ID | 7086852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2383816 |
End bp | 2384631 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643460921 |
Product | hypothetical protein |
Protein accession | YP_002357945 |
Protein GI | 217973194 |
COG category | [R] General function prediction only |
COG ID | [COG2384] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00140757 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00602396 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAATTA GCCAACGTTT ACAACAGATA AACAGCATGA TCAGTGGTCA TTACGATCAT ATTTGGGATT GCTGCTGCGA TCATGGTTTA CTCGGTATGC TGTTGCTAGA AAGGAGCGCT GCCCGCCATG TACACTTTGT CGATTGTGTC CCTTCGCTGA TGCAGGCGCT TGAACTGCGT TTGCAGCGTT TCTTCCCCGC TGACATATCA GGCCTAAATC CCAACTTAGC GCCACACTCA GATCCAGACT TAAACCCAGA CATAGACCCA CACTTAAACC TAGGCATAGA CCCAAATTTA AGTTGTCATA CTCAGTGGCA AGTGCATTGC CTTGATGTTG CGGCTTTACC GCTCGCGCAA ACCAGTGACA AGGATAAACA GTTGATCATC ATCGCTGGTG TGGGTGGTGA ACTGCTGGTG GACTTAGTGA AGGCAATTCT AGCCCAATAC CCACAGCGGC ACCTCGAATT TATTTTGTGT CCCGTGCATC ATAATTATTA TGTCAGGCAA TCACTCACTG CCTTAGGGCT AGGGCTTAAG TCAGAACACT TATTGGAAGA GAATCAACGT TTCTACGAAA TCCTCCATGT CAGTACAATC GCGGCTCCAA ATGGTCTGCT TATCAGTGCT ACGGGTTCGT TAATGTGGCA GACGTTAGAT GAAACAAGTT TGCCGCGAGC GCAGCGTTAT CTGTCGCAGG TGATTGGTCA TTACCTACGC ATGCCCACGC ATAAGCAAAC ACCAGAGATT ATTGATGCCT ATCAGCAGCA ATTGGCCCAG CTCTTAAGTG AGCATAGTGA GTTTGAATGC TCTTGA
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Protein sequence | MKISQRLQQI NSMISGHYDH IWDCCCDHGL LGMLLLERSA ARHVHFVDCV PSLMQALELR LQRFFPADIS GLNPNLAPHS DPDLNPDIDP HLNLGIDPNL SCHTQWQVHC LDVAALPLAQ TSDKDKQLII IAGVGGELLV DLVKAILAQY PQRHLEFILC PVHHNYYVRQ SLTALGLGLK SEHLLEENQR FYEILHVSTI AAPNGLLISA TGSLMWQTLD ETSLPRAQRY LSQVIGHYLR MPTHKQTPEI IDAYQQQLAQ LLSEHSEFEC S
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