| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1978 |
|---|
| Symbol | |
|---|
| ID | 7086812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2338414 |
|---|
| End bp | 2340171 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643460881 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_002357905 |
|---|
| Protein GI | 217973154 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00518519 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000000194119 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTCC CTAGTTTGAT TTCGTTTATG CCGGGATTGG CGCAATTATT ACAATATGAA
AAGCAATGGC TTAGGGATGA TGTGCGCGCA GGCTTGTCCG TTGCCGCTGT GGCACTCCCT
GTCGCCATTG CCTATGCCCA GCTCACTGGC GTCAATGCTG CTGTGGGTTT GTACTCCTGC
GTTTTGCCTA TGCTGGTATA CGCGCTATTT GGCACCTCAA AGCAATTAAT CGTGGGTCCA
GATGCGGCGA CCTGCGCCGT TATCGCCGCC GTTGTTACGC CCCTCGCTGC GGGCGATAGC
ATGAAGCACT GGCAGTTAGT CATGACCATG ACGGCCATGA CAGGCTTTTG GTGCTTGATC
GCGAGCCGTT TTAAGCTGGG TGTGCTTGCT GATTTTCTGT CAAAGCCGAT TTTGATGGGA
TTGCTGAACG GGGTCGCGAT CACCATTATC GTCGGACAAT TTTCGAAGAT TTTTGGTTTT
ACCTTCGACG AGCGCTATTT AATCGAACGC CTCAGCGGCG CCCCTTCTTA TTTATCAAAA
ACCCATTGGC CGACGTTGAC TATGGGGATT GTGACGCTGG CGACCTATGC CTTAGTGAAA
CGGTTTCGTC CCCAATGGCC CGCATCTATG TGCGCGATGG CGATGGCGGC ATTCCTTGTT
TGGGTATTTA ACCTGACGAG CTTTGACATT AGCGTTGTCG GGGAGGTGAC CTCAGGACTA
CCTTCATTCC AAGCACCGGC TTTTGATTTG GGGATCGCCC GTGAGTTGGT GGTGCCTGCG
CTCAACTTAG CCATGGTGAG CTTTGTGAGC ATGATGCTGA CCGCCCGAAG TTTTGCGGCA
AAAAATGGTT ACGATATAGA TGCAGATAAA GAATTTAGGG CGTTAGGTTT AGCCAATATC
GCATCTGCCA TCTCCCAAGG GTTTGCCGTG AGCGGCGCCG ATTCCCGCAC TGCGGTGAAC
GATGCCAATG GCGGTAAGAG TCAGTTAGTG TCCATCATAG CGGCGGTATT GATTGGCGTT
GTGGCGCTGT TTTTTACTGC GCCGTTGAAA TACATCCCTA GCGCAGCATT AGGGGTGGTA
TTGGTGATTG CCTCTATTTC GCTTATCGAT CTTAAGTCGC TGTGGAATCT GCGTGTGCGC
GATAAGTCAG CTTTCTTGCT TGCGTGTATT ACCTTGTTCT CCGTGCTGTT TATTGGGGTG
ATTCCTGGGA TCACTTTGGC CGTGTTACTG GGGTTATTCC AGTTCCTTGC TACGGTAATG
CGCCCCACGG ATCAAGTGCT TGGCTTAGAT CATAAGGGCG TTATCCGCAG CGTCGATGAT
TCGGGTAAAG CCAAATCTGT GCCTGGCGTG TTTATGTATC GCTTTAATTC GCCGTTAACT
TACTTTAATG CGACGTATTT TAAGCGCCGT TTACTGGAAA AGTTTATTCG GGAATCTGAG
CCGGTCGATT GCATCATTAT TGATGCTGTG CCTTGTTTTA CCCATTTAGA TTTAAGTGTG
ATGGCCATGT TGGCAGATTT ACATCAATTG CTTAAAAAGC GTGGAGTACG CTTAGTGCTT
GCGGGGCGTA AACGACAGAT GCTGAGTTGG TTCGAGCAAG CGGGTATGCA GACAGGGGAA
GGCGGCATTC TGATCCGGCC AGATTTGTAT CTCGCCCTTA AAATGAATCA AAGCTATAAA
CAAGCCTTGG CTGAAGGGCA AGCGCCTGTG ATCCAAAAAG TCCCCGATGA TGCTGTGCTG
TTGCATAGCC ATTTATAG
|
|---|
| Protein sequence | MKFPSLISFM PGLAQLLQYE KQWLRDDVRA GLSVAAVALP VAIAYAQLTG VNAAVGLYSC
VLPMLVYALF GTSKQLIVGP DAATCAVIAA VVTPLAAGDS MKHWQLVMTM TAMTGFWCLI
ASRFKLGVLA DFLSKPILMG LLNGVAITII VGQFSKIFGF TFDERYLIER LSGAPSYLSK
THWPTLTMGI VTLATYALVK RFRPQWPASM CAMAMAAFLV WVFNLTSFDI SVVGEVTSGL
PSFQAPAFDL GIARELVVPA LNLAMVSFVS MMLTARSFAA KNGYDIDADK EFRALGLANI
ASAISQGFAV SGADSRTAVN DANGGKSQLV SIIAAVLIGV VALFFTAPLK YIPSAALGVV
LVIASISLID LKSLWNLRVR DKSAFLLACI TLFSVLFIGV IPGITLAVLL GLFQFLATVM
RPTDQVLGLD HKGVIRSVDD SGKAKSVPGV FMYRFNSPLT YFNATYFKRR LLEKFIRESE
PVDCIIIDAV PCFTHLDLSV MAMLADLHQL LKKRGVRLVL AGRKRQMLSW FEQAGMQTGE
GGILIRPDLY LALKMNQSYK QALAEGQAPV IQKVPDDAVL LHSHL
|
|---|
| |