| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1961 |
|---|
| Symbol | |
|---|
| ID | 7090128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2321439 |
|---|
| End bp | 2322653 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643460864 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | YP_002357888 |
|---|
| Protein GI | 217973137 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.037165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00267346 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCCACCACGC CTGTTGATCC AAGAGTCGCG
GAAAAGATGT TCCAATGTAT GACAATGGAC GGCATCTTTG GTAATCCAGC CTCACGTTCA
CATCGCTACG GCTGGCAAGC TGAAGAAGCG GTGGATATTG CTCGCAATCA AATTGCCGAG
TTAATTAACG CCGATCACCG CGAAATTGTG TTTACCTCTG GCGCGACGGA ATCGAACAAC
TTAGCGATTA AAGGTGTTGC TCATTTCTAT CACAAGAAAG GCAAGCACAT CATCACCAGT
AAGACTGAAC ATAAAGCCGT TCTTGATACC TGTCGCCAAT TAGAGCGCGA AGGTTTCGAA
GTGACTTATT TAGAGCCTGC GGCTAACGGC ATCATTCCGA TGGAACGTTT AGAAGCGGCA
ATGCGTGACG ACACTATCCT TGTCAGCATC ATGCACGTGA ACAACGAAAT CGGTGTGATC
CACGATATCG ATGCAATCGG TGAGCTTTGC CGTTCAAAGG GCATTATTTT CCACATGGAT
GCAGCGCAAA GTGCAGGCAA AGTGCCTATC GATGTGCAAG CCACTCAAGT GGATTTGCTC
TCGATTTCTG GTCACAAAAT GTATGGCCCT AAAGGTATCG GCGCGCTATA TGTTCGTCGT
AAGCCACGCA TTCGCTTAGA AGCGCAAATG CACGGTGGTG GTCATGAGCG TGGTATGCGT
AGCGGTACGC TACCAACGCA TCAAATCGTA GGTTTAGGTG AAGCTGCTGC AATCGCAAAA
GCGGAAATGG CCTCTGATGA TGCTCGTATC GGTGCATTAC GTGACAAATT ATGGAATGGC
ATCAAGCACA TTGAAGAAAC CTATATCAAT GGTGATGCGA TTGAGCGCGT TAGCGGTAGC
CTCAACGTTA GCTTCAACTA TGTTGAAGGC GAGTCGTTAA TGATGGCACT GAAAGATTTA
GCGGTTTCAT CGGGTTCGGC TTGTACCTCA GCCAGCCTAG AGCCTAGCTA CGTATTACGT
GCGCTTGGCT TAAACGATGA AATGGCACAT AGCTCGATTC GTTTCTCTAT CGGCCGTTTC
ACAACCGAAG AAGAAATTGA TCACGCTATC GAAGTAATTA CTCAATCTAT TGATAAATTA
AGAGAAATGT CTCCTTTGTG GGAAATGTTT AAAGATGGAA TCGACCTGAA CCAAGTTCAA
TGGGCACATC ATTAA
|
|---|
| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMFQCMTMD GIFGNPASRS HRYGWQAEEA VDIARNQIAE
LINADHREIV FTSGATESNN LAIKGVAHFY HKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLEPAANG IIPMERLEAA MRDDTILVSI MHVNNEIGVI HDIDAIGELC RSKGIIFHMD
AAQSAGKVPI DVQATQVDLL SISGHKMYGP KGIGALYVRR KPRIRLEAQM HGGGHERGMR
SGTLPTHQIV GLGEAAAIAK AEMASDDARI GALRDKLWNG IKHIEETYIN GDAIERVSGS
LNVSFNYVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTEEEIDHAI EVITQSIDKL REMSPLWEMF KDGIDLNQVQ WAHH
|
|---|
| |