| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1903 |
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| Symbol | |
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| ID | 7090070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2245360 |
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| End bp | 2245989 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643460807 |
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| Product | putative solute/DNA competence effector |
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| Protein accession | YP_002357831 |
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| Protein GI | 217973080 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0351843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.135941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCAA CAGAAAAGTT GACCGACACC AATGCAATTT TGGCGTATTT GTATGAAACA
TTTCCTTTGT GCTTTATTGC TGAAGGTGAA ACTAAGCCAT TAAAAATCGG ATTGTTTCAA
GATTTGGCTG AAAGGTTGGC TGATGATTCT AAAGTCAGTA AAACTCAGCT CAGAGTTGCC
TTAAGACGTT ACACCAGCAG CTGGCGCTAT TTAAAGTGCG TTAAAGCGGG CGCACAACGC
GTTAATCTGG ATGGCGAACC TTGCGGCGAG TTAGAGCAAG AGCACATTGA CCATGCTCAA
GCCATGTTGA AAGAGAGTCA GGATAAAGCG AAAGCGAAAC GTGCAGCACT CGCACCTAAG
CCTGCGGCGA AGAAAGCACC TAAAAAGGTG GCTGTTCCTC AACGTGCTAA AACTGAGCGT
CCTGCTAAGC CTGCGCCTAA AGCTGCAGCG CCAGTCGTAA ATTATGTCCA AGCACAATTG
ACTGATTTAA CGAAAAAACA ACGCGTCAAT GTTAAGTTAG GTATGACACC CGTAGCCGGT
GTGATTACTG ATATTAACAA GGAAGATATT CATGTTCAGC TTGATAGTGG CCTAACGATT
AAAGTTAGAG CAGAACATAT CCTGCTGTAA
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| Protein sequence | MESTEKLTDT NAILAYLYET FPLCFIAEGE TKPLKIGLFQ DLAERLADDS KVSKTQLRVA
LRRYTSSWRY LKCVKAGAQR VNLDGEPCGE LEQEHIDHAQ AMLKESQDKA KAKRAALAPK
PAAKKAPKKV AVPQRAKTER PAKPAPKAAA PVVNYVQAQL TDLTKKQRVN VKLGMTPVAG
VITDINKEDI HVQLDSGLTI KVRAEHILL
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