Gene Sbal223_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1891 
Symbol 
ID7090058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2232915 
End bp2233952 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content48% 
IMG OID643460795 
Productaminodeoxychorismate lyase 
Protein accessionYP_002357819 
Protein GI217973068 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.253385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0515475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TCATTCTTAT CGCCAGTTCA ACCCTGTTGA CCTTGCTGAC ATTAGTCTGT 
TTGGGCGCCT TTTGGGGCTA TCAAACTGTT ATCGAATACA GCCAAACGCC GCTGAGTCTC
AGCGAGCCTA AAGAGCTGAC CGTTGAACGC GGTACCAGCG TCAACCAGCT TGCGCAGCAA
CTTGCCGACG ATGGTGTGAT TCAAGACACG TGGAAACTCA AGTGGCTACT TAAGTTCCGC
CCTGAGCTTG CTAAGATCCG CTCGGGCCTT TACGAAATCT CACCTTCACA AACCATTACC
GATTTGCTGA ATAATTTGAT TGCCGGAAAA GTGAAAACCT TCAGTTTGAC CTTAGTTGAA
GGTAAAACCA TCGTTGAATG GGAACAACAA CTTGCCAGTG CGCCGCATTT ACAGATGTCA
CCAGAGGTGT TTTCCGCCGT GTTGATGGCG CAGGGCGATG ATTCAGGTTT GCCAGAGGGT
AAATTCTTCC CCGACACCTA TCATTATACC GCCGAGGCGG ATGTTAAAGT CCTGCTGACT
CAAAGCTATA AGATGATGGA GCAAGAGCTT GCCAAAGCGT GGGCAGAACG GGCGCCGAAT
TTGCCGTTAA AATCCCCCTA TGAAATGCTG ATCTTGGCAT CGATAGTCGA GAAGGAAACC
GGCCAAGCCC ATGAGCGCGA CCAAATTGCC GGAGTATTTG TTAATCGTCT TAATCAAGGC
ATGCGTCTGC AAACCGACCC GACGGTGATT TATGGCATGG GTGAACGCTA TAAGGGCAAT
ATCACCCGTA AAGATTTAGT CGAAGAGACA CCTTTTAACA CTTATCGTAT TTTTGGATTA
CCGCCAACGC CGATTGCAGC ACCGAGTAAA GCCTCACTGA TGGCAGTGTC TAAACCCGCT
AGTGTGAGTT ATCTCTATTT CGTGTCACGC AACGATGGTA CCCATGTGTT TTCATCCACA
CTTGAAGCAC ATAACCACGC AGTAGATGTG TATCAGCGTA AGAAAAAACC GGCGACGCCA
GAAAAATCAC CAAAGTAA
 
Protein sequence
MKKLILIASS TLLTLLTLVC LGAFWGYQTV IEYSQTPLSL SEPKELTVER GTSVNQLAQQ 
LADDGVIQDT WKLKWLLKFR PELAKIRSGL YEISPSQTIT DLLNNLIAGK VKTFSLTLVE
GKTIVEWEQQ LASAPHLQMS PEVFSAVLMA QGDDSGLPEG KFFPDTYHYT AEADVKVLLT
QSYKMMEQEL AKAWAERAPN LPLKSPYEML ILASIVEKET GQAHERDQIA GVFVNRLNQG
MRLQTDPTVI YGMGERYKGN ITRKDLVEET PFNTYRIFGL PPTPIAAPSK ASLMAVSKPA
SVSYLYFVSR NDGTHVFSST LEAHNHAVDV YQRKKKPATP EKSPK