Gene Sbal223_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1888 
Symbol 
ID7090055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2230852 
End bp2231490 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID643460792 
Producturidine kinase 
Protein accessionYP_002357816 
Protein GI217973065 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.27737e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0259304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTC AGCAGTGTGT CATTATTGCA ATTGCTGGCG CGTCAGCATC GGGCAAAAGT 
TTAATTGCCA AAACGATTTT TGACGAATTA CGCCGCGATT TAGGCACAGA TCAAATTGGG
GTAATTAATG AAGACGCGTA CTATCGCGAT CAGAGTCATT TATCCATGGA TGAACGGGTA
TTAACGAATT ACGATCATCC CAAAGCGTTG GACCATCAAC TGTTGTGCAC CCATTTACAG
TTGCTCAAGT CTGGCGAAGC TGTTGATATC CCTTGTTATA GCTACACAGA ACACACTCGT
ATAGCAGAAA CCCTGACTAT GACACCGAAA AAGGTGATCA TTTTAGAAGG TATCTTACTG
CTGACCGATC CTAAATTACG TGCGCTGATG GACGCGAGTG TGTTTATGGA CACACCGTTG
GACATTTGTT TCCTACGTCG CCTAACCCGT GATGTGGCTG AACGCGGTCG TACGATGGAA
TCTGTGATTT CTCAGTACAA GAAAACTGTG CGTCCTATGT TCTTACAGTT TATCGAACCG
TCGAAACAAT ACGCCGATAT TATCGTTCCC CGTGGCGGTA AGAATCGTAT TGCGACCGAT
ATTTTAAAAA CTCGTATCCA ACATTTACTG GCAAAATAA
 
Protein sequence
MNSQQCVIIA IAGASASGKS LIAKTIFDEL RRDLGTDQIG VINEDAYYRD QSHLSMDERV 
LTNYDHPKAL DHQLLCTHLQ LLKSGEAVDI PCYSYTEHTR IAETLTMTPK KVIILEGILL
LTDPKLRALM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYKKTV RPMFLQFIEP
SKQYADIIVP RGGKNRIATD ILKTRIQHLL AK