Gene Sbal223_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1883 
Symbol 
ID7086557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2224763 
End bp2225233 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content49% 
IMG OID643460787 
Product17 kDa surface antigen 
Protein accessionYP_002357811 
Protein GI217973060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.19533e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00180975 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGAAAC CTACTCTAGC AAGCTTTATG TTTATTTTTG CGTTTATCCT CAGCCCCGCG 
AGTGCGGGTT ATGACCGTAA TCAAGCCGTG CCTGTCGAGA AAGTGCTCTA TGGCGATATC
ACTTCGGTAC GTAATATCAC TGAAACCCAG CTGATTGAAG ACCGTAATCG AGGTTGGAAA
ACCTTTGGTG GCGCCTTAGC GGGTGGGGTG ATTGGTAATC AGTTTGGTGG CGGTTCTGGC
CGTGATGTGG CGACCATTTT AGGTGCCTTG ATTGGTGGAG GTATCGGCAA TCGTTATGGC
AGTGGCACGA ACGTGCAGTC ATTGAAGCTG GTGGAATTGA TGATCAATCA AGAAGATGGC
ACCCAAGTTA TGGTGATCCA AGACTATGAT GCTGGCATGG TATTCAATGC GGGTGACAGA
GTACGTGTCG TCTATCTGCA AGGTGGTGTG CGTGTTGATG TCGCGATGTA A
 
Protein sequence
MWKPTLASFM FIFAFILSPA SAGYDRNQAV PVEKVLYGDI TSVRNITETQ LIEDRNRGWK 
TFGGALAGGV IGNQFGGGSG RDVATILGAL IGGGIGNRYG SGTNVQSLKL VELMINQEDG
TQVMVIQDYD AGMVFNAGDR VRVVYLQGGV RVDVAM