Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1876 |
Symbol | |
ID | 7086550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2217311 |
End bp | 2219536 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460780 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_002357804 |
Protein GI | 217973053 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.436386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000229787 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGATA ACTCATCAAC AATTATTTAC ACTGAAACAG ACGAAGCGCC AGCACTGGCC ACCCTCTCAC TTTTACCTAT TATCAGAACG TTTACCGACG CCGCGGGCGT TGCGGTTGAA ACCCGTGATA TCTCGTTATC GGGTCGTATT ATTGCCAGTT TCCCTGAGCA ACTGACCGAA GCACAAAAGA TTGGCGATCA TCTGACTGAG CTTGGCGAGT TAGCGAATCA GCCAGAAGCG AACATCATCA AGTTACCGAA TATCAGTGCT TCGATTCCAC AATTAAAAGC CTGTATCCTT GAACTGCAGC AAAAAGGTTA TGACATCCCT CACTATCCGG ATGAGCCAAA AACCGACGCT GAAAAGTCAA TTAAAACCCG TTACGACAAG ATTAAAGGCA GTGCGGTAAA CCCAGTACTG CGTGAAGGTA ACTCAGATCG CCGTGCCCCA TTATCGGTGA AAAACTTCGC CAAGAAAAAT CCGCATTCAA TGGGTAAATG GGCTACAGAT TCTAAGTCTC ACGTTGCTCA TATGACCGAC GGCGATTTCT ACGGCAGCGA GCAGTCAGTG ACTTTATCTG ATGCGGGCAG CGTGAATATC GTGCTGACGC AAAAAGATGG CCAAGAAGTA GTGCTCAAGT CCGGTCTTAA GCTGCTGGCT GGCGAAATTA TCGATGCTGC GGTATTGAGT AAAAAAGCCT TAGTGAGCTT CTATGAGCGT GAAATCGAAA ACGCCAAAGC AGAAGATGTG CTGTTATCGC TGCATCTGAA AGCCACTATG ATGAAAGTGT CTGATCCTAT TATGTTTGGT CACGCTGTGA AGGTATTCTT CAAGCCAGTA TTTGACAAGC ATGCGGCGCT TTTCGCTGAA TTAGGTGTAG ATGTTAACAA CGGTTTTGGT GATGTTTATG CCAAGATCGC GACATTACCT GCCGATAGCC GCGCCGAAGT CGAAGCCGAT ATCGCCGCCG TTTACGCTGC ACGTCCCGCA TTGGCTATGG TTGATTCTGA CAAAGGTATC ACCAATTTAC ACGTGCCAAG CGACATCATT ATCGATGCAT CTATGCCTGC TGCGATTCGT TCATCTGGCC AAATGTGGGG ACCAGATGGT CAACTGCATG ACACTAAAGC CATGATCCCA GATCGTTGCT ATGCGGGTAT CTACCAAGAA ACGATTGCCT TCTGTAAAGA GCACGGCGCT TTTGATCCTA AAACCATGGG CAGCGTGCCA AACGTGGGCT TGATGGCGCA AAAAGCCGAA GAGTACGGCA GCCACGACAA GACCTTTGAA ATGCCTGCTG ACGGTGTGGT CAACGTTGTC GATGCAAGTG GTAAGGTATT GATGAGCCAT AACGTAGAAG CGGGCGATAT CTGGAGAATG TGCCAAGTTA AAGACGCGCC TATCCGTGAT TGGGTCAAAC TGGCCGTGCG CCGTGCCCGT TTAAGCAATA CCCCAGCGGT ATTCTGGTTA GATAGCAAAC GTGCCCACGA TGCGCAAATC ATTGCAAAAG TGCAGCAGTA TCTGCCAGAA CATGACACTG ATGGCTTAGA TATCAGCATC ATGTCTCCAG AAGACGCGAC GCGTTTGTCT TTGGCTCGCA TCAAAGAAGG CAAAGATACC ATTTCAGTTA CGGGTAACGT TCTACGTGAC TACCTGACTG ACTTGTTCCC CATCCTAGAG CTGGGCACCA GTGCCAAAAT GCTATCAATC GTTCCGTTAA TGAACGGCGG CGGTCTATTT GAAACAGGTG CGGGCGGTAG TGCGCCTAAG CACGTGCAAC AGGTTGAAAA AGAAGGTCAC TTACGTTGGG ATTCACTCGG TGAATTCTTA GCTCTGGCGG CGTCTCTTGA GCATTTAAGT CAAACTGTCG ATAATCCAAA AGCCCAAGTG TTAGCTGATA CCTTAGATCA AGCCATTGGT CAATTCTTAG ATAGCAATAA ATCGCCATCA AGAAGAGTCG GTGAGTTAGA TAACCGTGGC AGCCATTTCT ACTTAGCTAT GTACTGGGCA CAAGCCTTAG CCGCGCAAAC GGGCGATGAG CAGTTACAAG CCCACTTCAT TCCGTTAGCG CATGCGTTGG CGGCAAATGA GCAAGTGATT GTGGCTGAAT TAGCGACGGC ACAAGGTGCA CCAGTCGATT TAGGCGGTTA CTACCGTTTA GATGCGGCTA AGGCTGAAAA AGCCATGCGC CCAAGCGAGA CGTTAAACAA ACTGTTGATT GCTTAA
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Protein sequence | MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI IASFPEQLTE AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP HYPDEPKTDA EKSIKTRYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWATD SKSHVAHMTD GDFYGSEQSV TLSDAGSVNI VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER EIENAKAEDV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHAALFAE LGVDVNNGFG DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA FDPKTMGSVP NVGLMAQKAE EYGSHDKTFE MPADGVVNVV DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR LSNTPAVFWL DSKRAHDAQI IAKVQQYLPE HDTDGLDISI MSPEDATRLS LARIKEGKDT ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH LRWDSLGEFL ALAASLEHLS QTVDNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI VAELATAQGA PVDLGGYYRL DAAKAEKAMR PSETLNKLLI A
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