| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1873 |
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| Symbol | mnmA |
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| ID | 7086547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2214220 |
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| End bp | 2215338 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460777 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002357801 |
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| Protein GI | 217973050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000192838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000114036 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACATCAA TCGAACCCAC TCACACAGGA AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT
GTAGATTCAT CTGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT
TTCATGAAGA ACTGGGAAGA AGATGACAAC AACGAGTACT GCGCTGCCGC AGAAGATTTA
AAAGATGCCC AAGCCGTGTG CGACAAGCTC GGGATCAAGC TACACACAGT CAACTTTGCA
GCCGAATATT GGGACAATGT ATTTGAGTAT TTCCTCGCCG AATACAAAGC CGGCCGCACG
CCAAATCCCG ATATCATGTG CAACAAAGAA ATCAAATTTA AGGCATTTTT AGAATTTGCC
GACGAAATCC TCGACGCCGA TTACATCGCC ATGGGCCACT ATGTGCGCCG CCGTGATAAT
AGCGATGGCA GCACACAAAT GCTCCGTGGC GTCGATGGCA ATAAAGATCA AAGTTATTTC
CTCTACACCC TTAGCCACGA GCAAGTGGCT CGAAGTCTAT TCCCTGTCGG TGAATTGGAA
AAACATGAAG TACGTGAAAT CGCAAAAGAA ATGGGCCTAA TCACCCATGA TAAAAAAGAC
AGCACCGGCA TCTGCTTTAT CGGTGAGCGC AAGTTCACTG AATTCCTGGG CACTTATTTA
CCGGCGCAGC CTGGCAATAT CGAAACCCCA GAAGGCGAAG TCATAGGTAC ACACCAAGGG
CTGATGTACC ACACCTTAGG CCAGCGTAAA GGCCTAGGCA TTGGCGGCAT GAAAAACAGC
AATGACGATC CTTGGTATGT CGTCGATAAA GATCTTGAGC GTAACGTGTT GATCGTAGGG
CAAGGCGGAC ACCATCCTCG TTTGATGTCG ACCGGCATGA CAGTTAACCA ACTGCATTGG
GTGGATAGAA CCGGACCTGT CGATGGCTGT CATATCGCAG TGAAAACCCG TTATCGCCAA
CAAGATGTGC CTTGTACTTT GACCTACACA GATGAACACA CCTTAGGCGT GGTCTTCGAT
GAGCCTGTTG CGGCGGTGAC GCCAGGACAG TCTGCGGTAT TTTATGATGG TGAAGTCTGC
TTAGGTGGCG GCATCATAGA TCAATTGATC CGAGGGTAA
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| Protein sequence | MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL FMKNWEEDDN NEYCAAAEDL
KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT PNPDIMCNKE IKFKAFLEFA
DEILDADYIA MGHYVRRRDN SDGSTQMLRG VDGNKDQSYF LYTLSHEQVA RSLFPVGELE
KHEVREIAKE MGLITHDKKD STGICFIGER KFTEFLGTYL PAQPGNIETP EGEVIGTHQG
LMYHTLGQRK GLGIGGMKNS NDDPWYVVDK DLERNVLIVG QGGHHPRLMS TGMTVNQLHW
VDRTGPVDGC HIAVKTRYRQ QDVPCTLTYT DEHTLGVVFD EPVAAVTPGQ SAVFYDGEVC
LGGGIIDQLI RG
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