Gene Sbal223_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1858 
Symbol 
ID7086532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2194194 
End bp2194856 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID643460762 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002357786 
Protein GI217973035 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00870294 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000166193 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGCTAG AAAACTTAAA TATTATTATC GCAGACGATC ACCCATTGTT CAGAAATGCA 
CTACGTCAAG CACTGACCAC AGCGTTTGAG CATGCACAAT GGTTTGAAGC CGACAGTGCT
GACGCACTGC AATCTGTGTT GGATGTCCGT AGCGTCGATT ACGATCTTGT ACTGTTAGAT
TTGCAGATGC CCGGTTCCCA CGGCTACTCC ACACTTATCC ATCTACGCTC ACATTATCCC
GATTTACCCG TGGTAGTGAT TTCTGCACAC GAGGATATCA ATACCATTAG CCGTGCGATT
CATTATGGCA GCAGTGGTTT TATCCCTAAA TCGGCCTCGA TGGAAACCCT CAAAGAGGCA
CTGAGTGCGG TGTTATTCGG TGACATTTGG CTGCCTAAAG GCACAGAGGT TATTTCTATC
GATGACGACG CCGTTGATAA AATGGCCAGT AAATTATCCG ATCTCACGCC GCAGCAATAT
AAAGTGTTGC AGATGTTTGC CGAAGGTTTG TTAAATAAGC AAATTGCCTA CGATCTTGGT
GTCTCTGAAG CGACCATCAA AGCACACGCG ACTGCCATTT TTAGAAAACT GGGCGTTCGT
AACCGTACAC AAGCCGTCAT AGCACTCGCT CAGCTTGAGA TGGATAAAGT CGATTTATCT
TAA
 
Protein sequence
MKLENLNIII ADDHPLFRNA LRQALTTAFE HAQWFEADSA DALQSVLDVR SVDYDLVLLD 
LQMPGSHGYS TLIHLRSHYP DLPVVVISAH EDINTISRAI HYGSSGFIPK SASMETLKEA
LSAVLFGDIW LPKGTEVISI DDDAVDKMAS KLSDLTPQQY KVLQMFAEGL LNKQIAYDLG
VSEATIKAHA TAIFRKLGVR NRTQAVIALA QLEMDKVDLS