Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1858 |
Symbol | |
ID | 7086532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2194194 |
End bp | 2194856 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643460762 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002357786 |
Protein GI | 217973035 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00870294 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000166193 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGCTAG AAAACTTAAA TATTATTATC GCAGACGATC ACCCATTGTT CAGAAATGCA CTACGTCAAG CACTGACCAC AGCGTTTGAG CATGCACAAT GGTTTGAAGC CGACAGTGCT GACGCACTGC AATCTGTGTT GGATGTCCGT AGCGTCGATT ACGATCTTGT ACTGTTAGAT TTGCAGATGC CCGGTTCCCA CGGCTACTCC ACACTTATCC ATCTACGCTC ACATTATCCC GATTTACCCG TGGTAGTGAT TTCTGCACAC GAGGATATCA ATACCATTAG CCGTGCGATT CATTATGGCA GCAGTGGTTT TATCCCTAAA TCGGCCTCGA TGGAAACCCT CAAAGAGGCA CTGAGTGCGG TGTTATTCGG TGACATTTGG CTGCCTAAAG GCACAGAGGT TATTTCTATC GATGACGACG CCGTTGATAA AATGGCCAGT AAATTATCCG ATCTCACGCC GCAGCAATAT AAAGTGTTGC AGATGTTTGC CGAAGGTTTG TTAAATAAGC AAATTGCCTA CGATCTTGGT GTCTCTGAAG CGACCATCAA AGCACACGCG ACTGCCATTT TTAGAAAACT GGGCGTTCGT AACCGTACAC AAGCCGTCAT AGCACTCGCT CAGCTTGAGA TGGATAAAGT CGATTTATCT TAA
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Protein sequence | MKLENLNIII ADDHPLFRNA LRQALTTAFE HAQWFEADSA DALQSVLDVR SVDYDLVLLD LQMPGSHGYS TLIHLRSHYP DLPVVVISAH EDINTISRAI HYGSSGFIPK SASMETLKEA LSAVLFGDIW LPKGTEVISI DDDAVDKMAS KLSDLTPQQY KVLQMFAEGL LNKQIAYDLG VSEATIKAHA TAIFRKLGVR NRTQAVIALA QLEMDKVDLS
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