| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1855 |
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| Symbol | |
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| ID | 7086529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2189095 |
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| End bp | 2191737 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643460759 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002357783 |
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| Protein GI | 217973032 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000497797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGTAAAT CGCTAGTTAT TGTCGAATCA CCGGCCAAAG CTAAGACTAT TAATAAATAT
CTTGGCAAAG AATTCATCGT TAAATCGAGC GTAGGTCACA TCCGTGATCT GCCGACATCA
TCGACTTCAG AAGGCAATGA AAAGGTTAAA TCCGCTGCCG AAGTTAAGAA AATGTCGCCA
GAAGAAAAAG CTCAATATAA AAAGGTGAAA GATCAGCAAG CGCTGGTGTC TCGCATGGGC
GTAAACCCTG AAAAGGGCTG GGCGGCTAAG TATCAAATTT TGCCGGGCAA AGAAAAGGTC
GTTAAAGAGC TACAGGCACT TGCCGATTCT GCCGACCAAA TCTATCTCGC AACCGACTTA
GACCGTGAGG GAGAAGCTAT CGCCTGGCAT TTGCAAGAAG TGATTGGCGG TGATCCTTCA
CGGTATCAAC GTGTAGTTTT CAACGAAATT ACTAAGTCTG CGATTCAAGA TGCCTTTAGC
AAGCCGTCGA CACTCGACAC TAACATGGTT AATGCCCAGC AAGCTCGTCG CTTCTTAGAC
AGAGTTGTCG GTTTTATGGT GTCGCCACTG CTGTGGAAAA AAGTCGCTCG CGGTTTATCC
GCTGGACGAG TGCAGTCGGT TGCCGTTCGC TTAGTGGTTG AACGTGAAAG CGAAATTAAA
GCCTTTGTAC CGGAAGAGTT CTGGGATGTA CATGCAGAGC TGAGTACGCC CGCTCAAGAA
GCCTTGCGGA TGGAAGTGGT TAAGCATTTA GATGCGGCCT TTAATCCTAT CAATGAACAG
CAAGCGATGG CGGCGGTTCA AGCGTTATCC GCGGCGAGTT TTACCGTGCT GGCCCGCGAA
GACAAAGCGA CCCAAAGCAA ACCTTCTGCG CCTTTTATTA CGTCGACATT GCAACAGGCC
GCGAGTACGC GCTTAGGTTT CGGTGTGAAG AAGACCATGA TGATGGCTCA GCGACTTTAT
GAAGCTGGTC ATATCACTTA TATGCGTACC GACTCGACCA ATTTGAGTCA AGAAGCAGTT
GAAAACTTGC GTGATATGAT TGCCAAAGAG TTTGGTGATA AATATCTACC CGCTGAACCC
ATTCGCTACG GTTCTAAAGA AGGCGCACAA GAGGCTCACG AAGCGATTCG TCCATCGAAC
GTTCATGTCC AAGCGGCGAC CTTATCGGAC ATGGAGCGTG ATGCTCAGCG TCTATATGAG
CTGATTTGGC GACAGTTTGT GTCATGTCAG ATGACGCCAG CCCAATATGA TGCCACTAAG
TTGACCGTGA AAGCGGGTGA CTATGAGCTC AAGGCTACTG GACGCACTTT ACGTTTTGAT
GGTTGGACTC GCGTGCAAAC AGCACTCAAG AAGAAAAACG AAGAAGACAA TACGTTGCCA
TTTGTGGCAC AAGGCGATGT ATTAGCGTTA AAAGAGTTGC AACCTAAGCA ACACTTTACT
AAGCCGCCAG CTCGATACAG CGAAGCCTCT TTAGTTAAAG AATTAGAAAA ACGCGGTATT
GGCCGCCCAT CGACCTACGC AACTATTATT TCAACGATTC AAGATCGGGG TTATGTAAAA
GTTGAGAATC GTCGTTTCTA TGCCGAAAAA ATGGGTGAAA TTGTCAGCGA GCGATTAGTC
GGCAGTTTTG CGGATTTAAT GAGCTATGAC TTTACCGCCA GTATGGAGCA AACATTAGAC
GATGTGGCTC GCGGCGAATT AGATTGGAAA AAAGTGCTCG ATGGCTTCTA TGCTGACTTT
ACTAAGCAAT TAGAAAAAGC GGAGCTGGAT CCCGAAGAAG GTGGCATGCG TCTTAACCAA
ATGGTGATGA CGGATATCAA GTGCCCAACC TGTGGTCGCC CTATGGGTAT TCGTACAGGT
ACGACTGGTG TTTTCCTTGG TTGCTCTGGT TACGAATTAC CTCCCAAAGA GCGCTGTAAG
ACAACGATGA ACCTTACGCC TGGCGTTGAG GCGATTAGCG AAAACAGTGA AGATGCCGAG
ACTGATGCAC TGCGTGCGAA GCACCGCTGT AGTATTTGCG GCACAGCGAT GGACAGTTAC
CTAATTGATG AGAAGCGTAA GCTACACGTC TGTGGTAACA ACCCGATTTG TGAAGGCTAT
GAAGTCGAAG AAGGCCAATT CAAGATCAAA GGCTATGAAG GTCCGCTGAT TGAGTGTGAT
CGCTGTGGCC ACGACATGGA ACTGAAAAAC GGCCGTTTTG GTAAGTATTT TGGTTGTACC
AATAGCGAAT GTAAAAATAC GCGTAAATTA CTGAAGAACG GCGAGGCTGC GCCACCAAAA
GAAGATCCTA TCTATTTGCC TGATCTGAAA TGCAGCAAAT CGGATGCCCA TTTCGTATTA
CGTGATGGTG CAGCAGGGAT CTTCTTAGCG GCCAGTACTT TCCCTAAATC ACGGGAAACC
CGTGCACCTC TGGTTGAAGA GCTGGTTCAA TACCGCGAGC TGCTGTGGCC TAAGTATCAA
TATTTAGCCG ATGCGCCCGT CACTGATGAC GAAGGCAATA AAGCTGCGGT GAAGTTTAGC
CGTAAGACGA AAGAGCAATA CGTTGCGACT GAAGTCGACG GCAAAGCCAC TGGTTGGTCA
GCGCATTACG TTAATGGCAA GTGGGTGAGT GAGACTACCA AGAAAGCCAA GAAAAGCGCA
TAG
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGKEFIVKSS VGHIRDLPTS STSEGNEKVK SAAEVKKMSP
EEKAQYKKVK DQQALVSRMG VNPEKGWAAK YQILPGKEKV VKELQALADS ADQIYLATDL
DREGEAIAWH LQEVIGGDPS RYQRVVFNEI TKSAIQDAFS KPSTLDTNMV NAQQARRFLD
RVVGFMVSPL LWKKVARGLS AGRVQSVAVR LVVERESEIK AFVPEEFWDV HAELSTPAQE
ALRMEVVKHL DAAFNPINEQ QAMAAVQALS AASFTVLARE DKATQSKPSA PFITSTLQQA
ASTRLGFGVK KTMMMAQRLY EAGHITYMRT DSTNLSQEAV ENLRDMIAKE FGDKYLPAEP
IRYGSKEGAQ EAHEAIRPSN VHVQAATLSD MERDAQRLYE LIWRQFVSCQ MTPAQYDATK
LTVKAGDYEL KATGRTLRFD GWTRVQTALK KKNEEDNTLP FVAQGDVLAL KELQPKQHFT
KPPARYSEAS LVKELEKRGI GRPSTYATII STIQDRGYVK VENRRFYAEK MGEIVSERLV
GSFADLMSYD FTASMEQTLD DVARGELDWK KVLDGFYADF TKQLEKAELD PEEGGMRLNQ
MVMTDIKCPT CGRPMGIRTG TTGVFLGCSG YELPPKERCK TTMNLTPGVE AISENSEDAE
TDALRAKHRC SICGTAMDSY LIDEKRKLHV CGNNPICEGY EVEEGQFKIK GYEGPLIECD
RCGHDMELKN GRFGKYFGCT NSECKNTRKL LKNGEAAPPK EDPIYLPDLK CSKSDAHFVL
RDGAAGIFLA ASTFPKSRET RAPLVEELVQ YRELLWPKYQ YLADAPVTDD EGNKAAVKFS
RKTKEQYVAT EVDGKATGWS AHYVNGKWVS ETTKKAKKSA
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