| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1831 |
|---|
| Symbol | gltA |
|---|
| ID | 7086505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2161654 |
|---|
| End bp | 2162940 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643460735 |
|---|
| Product | type II citrate synthase |
|---|
| Protein accession | YP_002357759 |
|---|
| Protein GI | 217973008 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000179965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.249033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT TAAAAGCCAA ATTAGAATTA CCAGGGAACG ACTCAATAGA ATTGCCAGTA
AAGCAGGGAA CCGCTGGTTT TGACGTAATC GACATCAGTA AACTTGGCAG CAAAGGTTAC
TTCACTTTTG ATCCAGGTTT TCTTGCGACT GCCTCCTGTG AATCTGCAAT TACCTATATT
GATGGTGATC TGGGTATATT GTTACACCGT GGCTATCCAA TCGATCAACT CGCCGTTGAC
TCCGATTACC TAGACCTGTG TTATCTGCTG CTTTACGGTG AACTGCCGAC AAAAGCGCAA
TATACTGAGT TTGTACATAC AGTTAAAACC CACACTATGG TTCACGAGCA GCTAGCCTTC
TTCTTTAGAG GTTTCCGTCG TGATGCTCAT CCTATGGCCA TGTTATGTGG TGTGACGGGT
GCATTATCTG CATTTTACCA AGACTCTCTG GATGTTAACG ATCCACGTCA CCGCGAAATC
GCCGCTTATC GCTTAGTCTC AAAAATGCCT ACGATAGCAG CCATGTGCTA CAAGTATTCT
TCAGGCCAGC CATTCGTGTA CCCACGTAAT GACTTAAGCT ATGCGGGCAA CTTCTTAAGC
ATGATGTTTG CTGTGCCATG TGAAGAATAC ATAGTTAACC CTATCGTTGA ACGTGCAATG
GACAGGATCT TCATTTTACA TGCGGATCAT GAACAAAACG CATCGACTTC AACCGTACGT
TTAGCCGGTT CTTCAGGTGC TAACCCATTT GCGTGTATCG CAGCGGGTAT CGCGTCTCTT
TGGGGCCCTG CACACGGCGG CGCTAACGAA GCCTGTTTGC AAATGTTAGA AGAAATCGGT
TCAGTTGACC GCATTCCTGA ATTCATTGAA CGTGCTAAAG ACAAGAACGA CCCATTCCGT
CTGATGGGCT TTGGACACCG TGTTTACAAA AACTTTGACC CACGTGCCAA AGTTATGCGT
GAAACCTGTC ACGAAGTGCT GAAAGAACTG AAAGTTAAGG ATCCACTATT GGATGTGGCA
ATGGAGCTTG AGCGCATTGC GCTTGAGGAC GAATACTTCA TTTCTAAGAA GCTGTATCCA
AACGTCGACT TCTACTCTGG CATCATCATG AAAGCCATTG GTATTCCAAC CAGTATGTTC
ACTGTGCTGT TCGCACTGGC ACGTACTGTA GGCTGGATTG CACACTGGAA AGAAATGTTA
GATCAACCAG GCCACAAAAT CAGCCGTCCA CGTCAGTTAT ACACTGGCGA AACTGCGCGT
GATTTCGTCG CACAAGACAA ACGCTAA
|
|---|
| Protein sequence | MADLKAKLEL PGNDSIELPV KQGTAGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI
DGDLGILLHR GYPIDQLAVD SDYLDLCYLL LYGELPTKAQ YTEFVHTVKT HTMVHEQLAF
FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDPRHREI AAYRLVSKMP TIAAMCYKYS
SGQPFVYPRN DLSYAGNFLS MMFAVPCEEY IVNPIVERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLQMLEEIG SVDRIPEFIE RAKDKNDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLKEL KVKDPLLDVA MELERIALED EYFISKKLYP
NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGETAR
DFVAQDKR
|
|---|
| |