Gene Sbal223_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1792 
Symbol 
ID7088326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2109786 
End bp2110670 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID643460696 
Productdihydrodipicolinate synthase 
Protein accessionYP_002357720 
Protein GI217972969 
COG category[M] Cell wall/membrane/envelope biogenesis
[E] Amino acid transport and metabolism 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.68333e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.44356e-09 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCAATGA ACAGTGATGG CTCAGTAGAT 
TTTGCAAGTC TTGAAAGGTT AGTCGAATTC CATATTGACC AAGGCACAGA TGCCATTGTG
GCCGTTGGTA CTACTGGCGA GTCAGCGACT CTGCCTATGT CTGAGCATGT AACGGTCGTT
TCACAAACCG TTAAGTTTGC TGCGGGCCGC GTTCCTGTCA TTGGTGGCAA TGGTGCCAAT
GCCACATCTG AAGCCGTTGA GCTCACCAAG TCCTTATCTA AGGTGGGTGT TGCCGCTATG
CTTGGCGTAA CGCCATATTA TAATAAGCCA ACTCCTAAGG GATTGATTGC GCATTATAAA
GCCGTGGCTG CCAGCACAGA TATTCCACAA ATTCTTTATA ATGTCCCTGG CCGTACTGCC
GTTGATATGT TGCCAGAAAC CGTTGCCGAG TTAGTCAGCG TTAGCAACAT TATTGGCGTG
AAAGAAGCGA CCGGTGACTT ATCCCGTGTA AAACGTCTGC GCGAACTGTG CGGCGACGAT
TTCCTTTTGT ATAGCGGCGA TGATGCCACT GCCAGAGAGT TCTTACTCTT AGGCGGCAAT
GGCGTGATTT CAGTGGCGAA CAACATAGTG CCACAAGCCT TTAAAGCTAT GTGTGATGCG
GCGCTTGCCG GTAATGCTGA GCTTGCGCTG AGCATAGACA CACCACTGCG CGGTTTATAC
AGCACACTCT TTTGTGAAGC CAATCCTATC CCTGTTAAAT GGGCTGCCCA TCGCATGGGT
TTGATTGAAT GTGGCCATAT TCGTTTACCT TTGACTGAAC TTTCTGAGCA ATGTCATGGT
CTGTTGATAG AAGCAATGAC TCGTGCCCAG ATAGAGGTTA AATAA
 
Protein sequence
MINGSIVALI TPMNSDGSVD FASLERLVEF HIDQGTDAIV AVGTTGESAT LPMSEHVTVV 
SQTVKFAAGR VPVIGGNGAN ATSEAVELTK SLSKVGVAAM LGVTPYYNKP TPKGLIAHYK
AVAASTDIPQ ILYNVPGRTA VDMLPETVAE LVSVSNIIGV KEATGDLSRV KRLRELCGDD
FLLYSGDDAT AREFLLLGGN GVISVANNIV PQAFKAMCDA ALAGNAELAL SIDTPLRGLY
STLFCEANPI PVKWAAHRMG LIECGHIRLP LTELSEQCHG LLIEAMTRAQ IEVK