Gene Sbal223_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1787 
Symbol 
ID7088321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2105574 
End bp2106437 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content48% 
IMG OID643460691 
Productheat shock protein HtpX 
Protein accessionYP_002357715 
Protein GI217972964 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000109217 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000294805 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAGCGTA TATTTTTATT GATTGCGACT AACCTAGCGG TGTTGCTAGT AGCCTCAATT 
GTAATGTCTA TTCTAGGCGT GAACACGTCT ACTATGGGTG GACTGCTGGT GTTCGCTGCC
ATTTTTGGAT TCGGTGGGGC CTTTATCAGC TTAGCCATTT CAAAATGGAT GGCGAAAAAG
ACCATGGGTT GTGAAGTGAT CACCACCCCA CGTGACAGTA CCGAACGTTG GTTAGTGGAG
ACGGTTGCCC GTCAAGCTAA GCAAGCGGGG ATTAAAATGC CAGAAGTGGC GATTTATCAA
TCACCCGACA TGAACGCGTT CGCTACAGGC CCAAGCAAAG ACAATTCATT AGTGGCTGTG
AGTACGGGTC TGTTATATGG CATGAGCCAA GATGAAATCG AAGGCGTATT GGCCCATGAA
GTGAGCCATG TTGCTAACGG TGACATGGTG ACCTTGACAC TGATCCAAGG TGTGGTGAAC
ACCTTCGTGA TCTTCGCGGC TCGTGTGGTT GCTGGCATTA TTAACAACTT TGTGTCGAGC
AATGATGAAG AAGGCGAAGG TTTAGGCATG TTTGCTTACA TGGCCGTGGT TTTCGTGTTG
GATATGTTAT TTGGTATCTT GGCTTCAATC ATCGTCGCTT ACTTCTCACG TATTCGTGAG
TACAAAGCCG ATGAAGGCGC GGCCCGTTTA GCGGGTAAAG GCAAGATGAT TGCTGCGCTT
GAGCGTTTAC GCCAAGGTCC AGAAAGCACG GCAATGCCTG CACAAATGTC TGCCTTTGGT
ATTAACGGCA AACGTTCAAT GGCGGAAATG ATGATGAGTC ACCCTCCATT AGAAAAACGT
ATTGCAGCGT TAAGAGCAAG CTAA
 
Protein sequence
MKRIFLLIAT NLAVLLVASI VMSILGVNTS TMGGLLVFAA IFGFGGAFIS LAISKWMAKK 
TMGCEVITTP RDSTERWLVE TVARQAKQAG IKMPEVAIYQ SPDMNAFATG PSKDNSLVAV
STGLLYGMSQ DEIEGVLAHE VSHVANGDMV TLTLIQGVVN TFVIFAARVV AGIINNFVSS
NDEEGEGLGM FAYMAVVFVL DMLFGILASI IVAYFSRIRE YKADEGAARL AGKGKMIAAL
ERLRQGPEST AMPAQMSAFG INGKRSMAEM MMSHPPLEKR IAALRAS