Gene Sbal223_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1786 
Symbol 
ID7088320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2104574 
End bp2105287 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content49% 
IMG OID643460690 
Productpeptidase E 
Protein accessionYP_002357714 
Protein GI217972963 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.61108e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.38049e-11 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAATCA ATGCCCTACT ACTGAGCAGC TCTCGTGTCG GTGATACACC TTATCTTGCC 
CACGCGATCC CTTTTATTAA ACCGCTTACC ACCAACGCGC AAAAATGGAT TTTTATCCCC
TATGCTGGCG TCAGCATGAG TTATGACACT TATTTAGCGT CTGTTGTAAC AGGATTAAGT
GAGCTTGAAC TCGATATCAG TGGCATTCAT CAGCATCCCG ATCCTCAACA AGCGATAAAA
GATGCCGACG GGATTTTAAT CGGCGGCGGT AACACTTTTC ATTTATTGCA CCAACTATAT
CGCTATGATC TGGTTACGCT GATTGGTGAG CAAGTCGCCC TTGGTAAACC TTATATCGGC
TGGAGCGCGG GCTCTAACGT ATCGGGACTG AGCATTCGCA CTACGAATGA TATGCCCATC
ATCGAGCCGC CGTCGTTCAA GGCATTAAAC TTAGTGCCGT TCCAGCTAAA TCCGCATTAT
TCCAATTACC AAGCACCGGG CCACAACGGT GAAACCCGTG CCCAGCGGTT ATTAGAGTTC
ACTAAAGTCG ACCCATTGAC TCCAGTGGTC GGCATCGTTG AAGGCTCAGC CCTGTGGCGT
CAAGGAGACA AACTCTCACT CTTAGGTGAC CAACCGGCGT ATTTGTTCTG CGGAGAACAG
CAAGAAATCC CTATCCCTGT GGGCAGCGAT CTGTCGCACT TACTCAAGGC CTAA
 
Protein sequence
MTINALLLSS SRVGDTPYLA HAIPFIKPLT TNAQKWIFIP YAGVSMSYDT YLASVVTGLS 
ELELDISGIH QHPDPQQAIK DADGILIGGG NTFHLLHQLY RYDLVTLIGE QVALGKPYIG
WSAGSNVSGL SIRTTNDMPI IEPPSFKALN LVPFQLNPHY SNYQAPGHNG ETRAQRLLEF
TKVDPLTPVV GIVEGSALWR QGDKLSLLGD QPAYLFCGEQ QEIPIPVGSD LSHLLKA