Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1700 |
Symbol | |
ID | 7086306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1991980 |
End bp | 1993227 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460601 |
Product | RDD domain containing protein |
Protein accession | YP_002357628 |
Protein GI | 217972877 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.6304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000345448 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAC AGCAAACGGA TTTGGGCAAA GACCCAAAAA CTATGGTGAC TCCCCATGCT TTTACCATTG CAGACACTGT GCTTTATACG CCATTGGCGG CGCCGCTAAA ACGCGCTTTA GCCATGTTGA TTGATGGTTT ACTGATCACA GTGTTAGCGG AGCAGATGGA TTGGATGTTT GTATTGCTGG TGGTCGGTAT CATTTATATT GAGAAACGCA GTCATCAATT GGGTCGTTTA CTCAAATGGG GACTTTATGC CGCAATGTTA GCTTTTATGC TGCTCACGAC CGCCGATAAC CTGCTTAATG TTAATGGTTC GAGCAATACC GATAATGAGC AGGCAGTTGA GGGGTCTGCA TTGGGTAAAC AAATTCTTAC CTCGCTTCCG GCCATCATTT CGTTGAGCCT TTGTGATAAT TACGCTTGTG GTCAAACTCA AGTTCAATCC CTGCGCGAGG TGATAGAAAA TGCTTCAGCA TCAAAGGGCA TGACAGAGAT TGAGCGACGG GAGATAGTCC TTAGCGCCAT CGCCAACAGT AGTTTGTCTG CCGCAGATAG CGAAAAGCTC CAGACGGAAG TCCTTGATGG CACCTTGTGG CCAGTTATCG CGCCCCAAGC TGAGTTGCAA ATGCTTGATA CTCAGTCTGA GCTGCTTAAG CCGATTCAAG CCATTGAAAA AATTGAACCA ACTGATCCCG CGCAAGGTGT TGCGGCTAAT GCTGCAAAAG TAACCGAAAC GACAGACACA ACCAAAACAG TACCTTCGCC AAGCACAAGA GTGAAAAGCG TCGATGATGA CGATGAATCC ACCACCCACA GTGTTATCGC TTGGGTCAAA GGCTTTATGA GTGATATGGG GCTGGGCTTT GGTTGGGCGG CGTTTTACTT TACCGTCTTT ACCGCCCGGT TTGATGGTCA AACCTTAGGC AAGAAGATGC TTGGCATTCG GGTGATCCAG CTCGATGGCG CTAAAATCAG TTTATGGGCC GCCTTTGGCC GTTATGGTGG TTACGCCGCA GGCTTCACTA CTGGCTTACT TGGCTTTATG CAAATATTTT GGGATGCCAA TCGGCAGGGG ATCCAAGATA AAATATCTTC AACAGTCGTG ATAGACTTAG CACAAATGCA TAAAAAGCAA CGATTAGAGC AGCCAGTACA GGGGCAAAGT GAGTTAGCGC CTGCGCTTAC AAATGATAAT GCCGCCTCTG CTCACCTTAC AACAAGCACC CGTTCGGAGC ACCTATGA
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Protein sequence | MKQQQTDLGK DPKTMVTPHA FTIADTVLYT PLAAPLKRAL AMLIDGLLIT VLAEQMDWMF VLLVVGIIYI EKRSHQLGRL LKWGLYAAML AFMLLTTADN LLNVNGSSNT DNEQAVEGSA LGKQILTSLP AIISLSLCDN YACGQTQVQS LREVIENASA SKGMTEIERR EIVLSAIANS SLSAADSEKL QTEVLDGTLW PVIAPQAELQ MLDTQSELLK PIQAIEKIEP TDPAQGVAAN AAKVTETTDT TKTVPSPSTR VKSVDDDDES TTHSVIAWVK GFMSDMGLGF GWAAFYFTVF TARFDGQTLG KKMLGIRVIQ LDGAKISLWA AFGRYGGYAA GFTTGLLGFM QIFWDANRQG IQDKISSTVV IDLAQMHKKQ RLEQPVQGQS ELAPALTNDN AASAHLTTST RSEHL
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