Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1675 |
Symbol | |
ID | 7086281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1958499 |
End bp | 1961051 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643460576 |
Product | protein of unknown function DUF470 |
Protein accession | YP_002357603 |
Protein GI | 217972852 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0827883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0257354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGAGAC GAGTGCGGGT GTTTATTAGC CTTATAATAT TCACTGTCTC ATTACTCTTG CTTTATAATT TAGAGCAAGA ATATCAATTA AGTGACATTA TTAAAGAGGT TAAAGGATTT TCATTTGTTG AGTTGTTATG TGCAGCACTA CTCACAGTGG GAAGTTACTC TTTATTAACC TTGTACGATT TTATTGCCGT TCGGAATATC GATAAGGAGA TACCTTATCG TAAAATAGTC CCTATTTCTT TTCTGGGTTT TACGTTCTCC AATACCATAG GTTTCTCGCT GTTAACGGGG ACGTCGATAA GATATAAGTT TTATTCCGAA CTTGGCTTAA GTGGTAATAA AATTACTCAA ATAGTCATTT CATGTTCAGT AACATTCTTC CTCGGACTCT TTTTTATTTG TGGTATTGCA CTGGTATGCT TTCCCGCTGA ACAATTATCA GCCTTACCTT TACCAACGTG GCTATTTTCC TTAACCACAG TGTTCGGTAT TGGCATGCTG CTCAGTGTAT TAGGTTATTT ACTGATGAGT GTGCTGCGGA AAAAGCCATT TAATTTTCGA GGCTTTGAAA TTACGCCACC TCTGTTATCT GTATCTTTAA GACAGTTGTT GGTGTCTTCA CTTGATTGGA TTGTCGTAGG AACCTTGTTT TATAGCTTAC TGCCCGCGGT AGAGAATTTG GGCTATATAC AGGTCTTAAG TATTTTCTTT GTTGCGAATG CGCTTGGGGT GCTTGCCCAT GTGCCGGGTG GTATTGGGGT GTTCGAGTCC GTCGTGACTG TGGCCTTATC GCAATATTTA CCGGTTGAGC AAATCCTCGG CGCCATTATT GTCTATCGGA TCATTTATTA CATTATTCCA TTTTTAATTT CTTTGGCATA CTTTGTTATT ACGATCGCAC TGTCAAATAA AGATAAAATT GTAAAATTAA ATACTCGAAT TGCATTTATC CGCCAACTGT TACCACCGCT ACTGAGTATC AGTGTATTTA GCTCAGGTTT ATTATTACTC TTGTCAGTGG TTAACCCTTC AATTATTCAT AAGTATCACT GGTTAGGTGA GTTAGTACCG CTGCCTATCA TCGAAATATC GAGCATCATT TTGAGTGTGA GTGGTGTCTT GCTATTGTTG TTATCCCATG GATTATTTAA ACGCTACCAT AATGCCTTTG AATTAACGAA AAAACTGCTG TTGGTGGGCA TGTTATTTAT TATGCTTAAG GGCGCGGAAT GGGAAATATC ACTCGCGATA GGATTAGTGT ACGCATTGAT GTTGCCATGT GAGAATTTGT TTTATCGAAA GGGTTCAGTC GTCGGGATTA AATACTCTTT GGGTTGGCTG TTATCACTTT CTGCAGCCTT ATTCTTGATG ATTTGGGTAT TATTTTTCTC CTATCAAGAT GTTGATTATG ATCATTCACT CTGGTTTACC TTCTCCCCCG ATAGCCATGT ATCACGAGCA TTGCGAGGAG GAGCGATTGC TATCTTTATC GTGCTTGCCT TTGTCGTGCG CTATTTTTCG TCTCGTACTC AGCTTAAATC ACCACAACTG GACACGCCTT CATTAAAGCA GGCGATGGAG ATTGTCGCGC AGTCGCCGAG CAGTCATGGC TATTTAGCCT TAGTGCAAGA TAAATCAATC CTATTTAACG AGGATAAAGA CGCCTTTCTT ATGTATGCAA GGGCCGGACA TTGCTGGGTG GTAATGGGCG ATCCTATTGG TAATCAACAT AAATTTGATG ATTTGTTGTG GCAGTTTAGG GAGTTATGCG ATGCCTACGA TGGTTGGCCG GTGTTTTATC AAGTGACGCA AAAATATCTG CCGAGCTTTT TAGAGCAAGG ATTAGGTTTA TATAAATTAG GCGAGGAGGC GATTGTTCAG CTCGACCAAT TTGACTTACC GTCGAGTCGC TATCGGAGTT TGCGCCAGAG TCATGCCAAG GCGCAGCGTG AAGGCTTAAG TTTTGCAGTG ATTGAGGCGA GCCAAGTGAG GGCCATACTG CCGCAATTAG AAGCCATATC ATCGACTTGG CTGAAGGCGA AGCAAGGGCG CGAAAAGGGG TTTTCTGTAG GCTATTTCTC TTCCGCCTAT CTGTGCTCGA CACCTATGGC ATTAGTGTAT GCAAACGGCG AACTCGTGGC GTTTTCAAAT ATTTGGGCCA GTACCGCTCA GGTTGAATTT TCTGTCGATC TGATGCGTTA CGAGCCTAAA TTATCGAGCA GTAATATCAT GGATTTTCTG TTTACTGAGC TATTGCTATG GGGAAAACAG CAAGGCTATC AGAGGTTTAA TCTCGGGATG GCGCCTATGT CAGGCTTGAC TGACAGAGCG TTGGTGCCAT TTTGGACTAA GCTAGCGAAG GTTGTGTATA AGAAGGGTAA TAAGTTTTAT AACTTTCAGG GGCTTAGAAG ATACAAGGAT AAGTTTAATC CAACGTGGGA GGCCAAGTAT TTGATTTGTT ATGGCGGATT ATCTCTGCCA ATTGTAGTGG GCAGTTTAGT GACATTAACG AGTCGTGGTG CAACCGGTGT ATTTAAAAAG TAG
|
Protein sequence | MGRRVRVFIS LIIFTVSLLL LYNLEQEYQL SDIIKEVKGF SFVELLCAAL LTVGSYSLLT LYDFIAVRNI DKEIPYRKIV PISFLGFTFS NTIGFSLLTG TSIRYKFYSE LGLSGNKITQ IVISCSVTFF LGLFFICGIA LVCFPAEQLS ALPLPTWLFS LTTVFGIGML LSVLGYLLMS VLRKKPFNFR GFEITPPLLS VSLRQLLVSS LDWIVVGTLF YSLLPAVENL GYIQVLSIFF VANALGVLAH VPGGIGVFES VVTVALSQYL PVEQILGAII VYRIIYYIIP FLISLAYFVI TIALSNKDKI VKLNTRIAFI RQLLPPLLSI SVFSSGLLLL LSVVNPSIIH KYHWLGELVP LPIIEISSII LSVSGVLLLL LSHGLFKRYH NAFELTKKLL LVGMLFIMLK GAEWEISLAI GLVYALMLPC ENLFYRKGSV VGIKYSLGWL LSLSAALFLM IWVLFFSYQD VDYDHSLWFT FSPDSHVSRA LRGGAIAIFI VLAFVVRYFS SRTQLKSPQL DTPSLKQAME IVAQSPSSHG YLALVQDKSI LFNEDKDAFL MYARAGHCWV VMGDPIGNQH KFDDLLWQFR ELCDAYDGWP VFYQVTQKYL PSFLEQGLGL YKLGEEAIVQ LDQFDLPSSR YRSLRQSHAK AQREGLSFAV IEASQVRAIL PQLEAISSTW LKAKQGREKG FSVGYFSSAY LCSTPMALVY ANGELVAFSN IWASTAQVEF SVDLMRYEPK LSSSNIMDFL FTELLLWGKQ QGYQRFNLGM APMSGLTDRA LVPFWTKLAK VVYKKGNKFY NFQGLRRYKD KFNPTWEAKY LICYGGLSLP IVVGSLVTLT SRGATGVFKK
|
| |