Gene Sbal223_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1571 
SymbolyajC 
ID7089972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1837988 
End bp1838320 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content44% 
IMG OID643460472 
Productpreprotein translocase subunit YajC 
Protein accessionYP_002357499 
Protein GI217972748 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.98712e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.23922e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTATTT CAAATGCATA CGCAAGCGCT GCCGGCGCAC CACAAGGTGG CGGCACGATG 
GAATTGATTT TCATGCTGGC AATTTTCGGC CTGATTTTCT ATTTCATGAT TTTCCGTCCG
CAATCAAAAC GCGTTAAAGA GCACAAAAAC CTGATGTCAT CAATCAGCAA AGGCGACGAA
GTGCTGACCA GTGGCGGGAT TTTAGGCAAG ATTGCAAAAA TCAGCGACGA AAGCGATTAC
GTGTTACTGA GCTTAAACGA CACGACTCAA ATCACGATCA AAAAAGACTA TATTGCAGCT
GTATTGCCTA AGGGCTCTAT CCAGTCGTTG TAA
 
Protein sequence
MFISNAYASA AGAPQGGGTM ELIFMLAIFG LIFYFMIFRP QSKRVKEHKN LMSSISKGDE 
VLTSGGILGK IAKISDESDY VLLSLNDTTQ ITIKKDYIAA VLPKGSIQSL