Gene Sbal223_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1557 
Symbol 
ID7088247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1824050 
End bp1825747 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content49% 
IMG OID643460458 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002357485 
Protein GI217972734 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.486878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00513105 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACAG ATAGAGCGTC TGAGAGTGCG ATTAAGCGTG ATGAAATAGA CTCAGTGCAT 
TCACTGGAAT CCAGTGCGGG GCTACTTTCT GCGTCCATTT GCCGTGAGGC GAGGATGAGC
CGCGATCCGC GTTTTGATGG TAAGTTTTTT GTGGGCGTAT TAACGACGGG CATTTATTGC
CGTACCGTGT GTCCCGCCGT CGCGCCAAAA GAGCAGAATG TGCGTTATTT TGATTCGGCC
GTGAAAGCCG CACAAGCTGG ATTACGCCCG TGTTTGCGTT GTCGGCCCGA CAGTGCGCCA
GGTTCAAATC CGTGGAAAGG CACTGGCACA ACGTTGGCGA GGGCCATTAG TTTAATTGAA
GCGGGCGCAT TAGCGGGGAA ATCATCGGGA GAGCCAGCGT CGACTGTGAC ACAATTGGCT
GACAGATTAG GGATCAGTAG TCGTTATCTC AATAAGCTCT TTACCGAAGG TTTTGGCACT
TCGCCTAAAC AATATGCCTT ATACCGGCAG TTACTGTTTG CAAAACAACT GCTACATCAA
ACCCAATTAC CTATCACCCA AGTCGCGTTG GCGGCGGGTT TCAACAGTAT TCGCCGTTTC
AATGAGGCAT TTAAGCAAAC CTTACAATTG ACGCCAACTC AATTAAGAAA GACCGCGTTA
ACTAAGGCGG CAAAGGAGCA GGATATTGAT TCATCAACAG GATTCGGTGA AATTGATACT
TTGGGTGAAT TTGTGCCGCA CTATGGATTA ACCTTATATC AATACTATCG ACCCCCATTG
GATTGGGCAT CGCAGCTGGC ATTTTATCGC TTACGTGCAG TGACAGGAAT GGAGTGGTTT
ACGCCGCAAA TGAGTCATCC ACAAGCGAGC GATGCAGTTC AGATTGCAGA TGAAACCTAT
GTTTCAGCAG AAGCCAAGGC TGACGATAAC GGGCTCGAAT ATGGTCGCTG TTTTGCCATA
GGCAAGATGC GCGGCACAGT GCAAATTATC CATGAACCTA AGCTAAATCG CTTCAAACTT
GCGATTGCTT TGACCGAAGA TTCCGCCGTC GATGAGTTGC AATTGCTGGT CACTGAGGTG
CGACGCATTT TAGATCTCGA TGCGGATATG CAGCAGATTG AGCAAGGTTT AAGTACGCTG
CCGAGTTTAG GTTTAACACC GTTTTCGGGA TTGCGCATTC CTGGCGCAGG ATCTTTGTTT
GAAGCGGTTT GCCGCGCGAT TTTGGGCCAG CAAGTGACGG TCGTGCAGGC AACTAAGTTA
CTGAATATAT TGGTTGAAGC CTATGGCGAG CGCTTTAGTC TCAATGGCCG CGAGTATCGA
TTATTCCCAA CACCCGAGGC GATTCGTGAG GCGAGTTTAA CTGAGCTAAA AATGCCGGGC
GCCCGTAAAT TAGCCCTCAA TGCGCTCGCG GCGTTTATCT GCGAACATCC TGAGGCGAGT
GTCGATGATT GGCTTAGCGT TAAAGGCATA GGTCCTTGGA CGATAGCGTA TGCCAAGCTT
CGTGGCTTGG GCGATCCAAA CGTGTTTTTA CATTCGGATT TGATTGTTAA AAAGCATTTA
TTGGCCTTAT ATATCAAGAA CAATAAGTTA GATGAAACGG CAGCCGCAGC AGTGAGCTAT
CCCAAATTGT GCGAGCAGCT GAGTCAACAA ATTGCCCCGT GGGGCAGTTA CTTAACCTTT
CAGCTCTGGC ATCAATAA
 
Protein sequence
MSTDRASESA IKRDEIDSVH SLESSAGLLS ASICREARMS RDPRFDGKFF VGVLTTGIYC 
RTVCPAVAPK EQNVRYFDSA VKAAQAGLRP CLRCRPDSAP GSNPWKGTGT TLARAISLIE
AGALAGKSSG EPASTVTQLA DRLGISSRYL NKLFTEGFGT SPKQYALYRQ LLFAKQLLHQ
TQLPITQVAL AAGFNSIRRF NEAFKQTLQL TPTQLRKTAL TKAAKEQDID SSTGFGEIDT
LGEFVPHYGL TLYQYYRPPL DWASQLAFYR LRAVTGMEWF TPQMSHPQAS DAVQIADETY
VSAEAKADDN GLEYGRCFAI GKMRGTVQII HEPKLNRFKL AIALTEDSAV DELQLLVTEV
RRILDLDADM QQIEQGLSTL PSLGLTPFSG LRIPGAGSLF EAVCRAILGQ QVTVVQATKL
LNILVEAYGE RFSLNGREYR LFPTPEAIRE ASLTELKMPG ARKLALNALA AFICEHPEAS
VDDWLSVKGI GPWTIAYAKL RGLGDPNVFL HSDLIVKKHL LALYIKNNKL DETAAAAVSY
PKLCEQLSQQ IAPWGSYLTF QLWHQ