Gene Sbal223_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1510 
Symbol 
ID7088200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1760302 
End bp1760694 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content42% 
IMG OID643460411 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_002357438 
Protein GI217972687 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000161891 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TTTTAGAGAT ATTAACTCAC GGCCGTCGTT TTAAAGCAGC AGTTAAAGAA 
CTTAGCGTTG AAGAGTTACG TGATTTAGCC GACAAATTAG ATAAAATTTT AGTAGAACGC
GAGTCTATGG CTGAGGAAGA AGAACAAGCC ATGGCAGCTC GTAATGCTAA GATTGAAGAA
ATCCGTCAAC AAATGGAAGC CGTTGGTTTA TCAATTGATG ACTTAGGTGG CGTAGCTGTT
AAAGCAACCG CGAAGAAACG CGCTCCTCGT CCAGCTAAAT ACCAAATCGA AGTTGACGGT
GAAATGGTTC AGTGGACTGG CCAAGGCCGT ATGCCAACCG TATTTAAGAA CGAGATCAAC
AAAGGTCGTT CTATGGAAGA TTTCTTAATC TAA
 
Protein sequence
MSEFLEILTH GRRFKAAVKE LSVEELRDLA DKLDKILVER ESMAEEEEQA MAARNAKIEE 
IRQQMEAVGL SIDDLGGVAV KATAKKRAPR PAKYQIEVDG EMVQWTGQGR MPTVFKNEIN
KGRSMEDFLI