| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1486 |
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| Symbol | |
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| ID | 7087539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1733279 |
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| End bp | 1735219 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643460389 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002357416 |
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| Protein GI | 217972665 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0306155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.36533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTT TGCAAGGCTT GTTCCGCTTA AAACGTGCTC ACAAACGTTT GGTGAGCGTT
GTTATTGATT CGGTTTTCCT TTGTTTTGCT TTCTGGGCTG CATTATTGGT TCGAGTTGAC
GATGTCAACG TACTTGTTAA TTGGGCTTAT TGGGCATTAC TGTTGCTTGT TGTCCCCTTG
AGTGTTGTAG GTTTTGCAAA ATTAGGCTTG TATCGAGCCG TATTACGTTA CATGGGACTA
CAAGCACTCA CTGCAATACT GTTTGGTGTT ATTGCCTCAA CAATAATTCT TGTTATCGTG
GCTTATTACT CTGAGGCGCA ATTACCTCGT ACAGTGCCTA TCATTTACGC TGCTTTTGCC
TTAGTTTTTG TTGGAGGGAC GCGTGCTATG GTGCGTTCGC TTGTCGGTTC AGGAATGAAG
CGGGTTGGTG AGCCGGTAAT AATTTATGGC GCTGGGGTGA GTGGTCGCCA ATTAGTCACT
GCATTAGTTC AGAGTCATGA ATATTATCCA TTCGCCTTTG TTGATGATGA TGAGTCGCTA
CATGGCATAG TTATCCAAGG TGTTTATGTT CATTCCCCTT CAATTATTAA AAAATTAATC
AATCAAAATT CTGCAACTAA AGTTCTTTTG GCTATGCCTA GTGCGCCGCG CTCGCGTCGA
CAAGAAATTT TATTGCAGCT TGAGCCTTTG GCTGTGCAAG TGCTTACCTT GCCTGCAATG
GCTGATTTGG TCAATGGCAC CAAACTTTAT AGTGATATTA AAGAAGTCGA AATTGATGAT
TTATTAGGGC GAGATGCAGT AAATCCAAGA GGCGATCTTC TTAGTGCGAA TATTCGTAAT
AAAGTAGTTA TGGTAACAGG GGCAGGTGGG TCTATCGGCT CAGAGCTTTG TCGCCAAATA
CTCAAGCAAA ATCCTAAAAA GTTAGTACTC TTTGAACTTT CTGAATATGC CTTATATGCC
ATTGAACGTG AATTACGCTT AACGGCGCAT GAGTTGGGTT TGGATGTCGA AATTTTCCCC
ATGATGGGTT CAGTTCAACG TGCTAATCGT ATAGAAGCAG TGATGAAGGC TTTTAGTGTA
CAGACTGTCT ATCATGCTGC TGCCTACAAA CATGTTCCGT TAGTTGAGCA CAATGTGGTT
GAAGGTGTTC GTAATAATGT GTTTGGTACC TTGTATACAG CTCAAGCCGC CATTGCTGCG
AAGGTTGAAA CTTTTGTATT GATTTCTACG GATAAAGCTG TGAGGCCGAC CAATATCATG
GGAACCACTA AGCGTATGGC TGAGTTGGTT CTGCAAGCAT TATCAAATTT AAATAATAAT
ACTCGTTTTT GTATGGTTCG TTTTGGTAAT GTTTTAGGCT CATCGGGTTC AGTAGTGCCT
TTGTTCAGAA GCCAAATTGC CAACGGTGGT CCGGTAACAG TCACTCACCC TGAAATCACT
CGTTTTTTTA TGACAATACC AGAGGCTTCT CAATTAGTGA TCCAAGCCGG TGCTATGGGT
AAAGGCGGTG ATGTATTTGT GCTGGATATG GGCAAATCGG TTAAAATCGT CGATTTGGCT
GCAAAAATGA TCCGTCTAAG TGGATTTGAA GTTAAGGATG AAAAAAATCC TGATGGTGAT
ATTGCGATTG AGTTTAGTGG TTTACGTCCT GGTGAAAAGT TATATGAGGA ATTGCTGATT
GGTGATGATG TTACTGGTAC TGAGCATGAG CGCATTATGA CTGCAAATGA AATATGTTTG
CCTTGGAATG AGCTCGAAAC TATTCTTTAT AGACTAGATA AAGCCTGTCA TGAATTCAAT
CATGAGGTTA TCCGCGACAT TTTGCTAACA ACGCCAACAG GATTTAATCC TACAGATGGA
ATTTGTGATC TAGTTTGGTT GCAAAAGAAA TCAATCACCG CAGTTGAAGA TAAAAATAAA
GTCGTTACTT TAGTTTCTTA G
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| Protein sequence | MEFLQGLFRL KRAHKRLVSV VIDSVFLCFA FWAALLVRVD DVNVLVNWAY WALLLLVVPL
SVVGFAKLGL YRAVLRYMGL QALTAILFGV IASTIILVIV AYYSEAQLPR TVPIIYAAFA
LVFVGGTRAM VRSLVGSGMK RVGEPVIIYG AGVSGRQLVT ALVQSHEYYP FAFVDDDESL
HGIVIQGVYV HSPSIIKKLI NQNSATKVLL AMPSAPRSRR QEILLQLEPL AVQVLTLPAM
ADLVNGTKLY SDIKEVEIDD LLGRDAVNPR GDLLSANIRN KVVMVTGAGG SIGSELCRQI
LKQNPKKLVL FELSEYALYA IERELRLTAH ELGLDVEIFP MMGSVQRANR IEAVMKAFSV
QTVYHAAAYK HVPLVEHNVV EGVRNNVFGT LYTAQAAIAA KVETFVLIST DKAVRPTNIM
GTTKRMAELV LQALSNLNNN TRFCMVRFGN VLGSSGSVVP LFRSQIANGG PVTVTHPEIT
RFFMTIPEAS QLVIQAGAMG KGGDVFVLDM GKSVKIVDLA AKMIRLSGFE VKDEKNPDGD
IAIEFSGLRP GEKLYEELLI GDDVTGTEHE RIMTANEICL PWNELETILY RLDKACHEFN
HEVIRDILLT TPTGFNPTDG ICDLVWLQKK SITAVEDKNK VVTLVS
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