Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1484 |
Symbol | |
ID | 7087537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1731439 |
End bp | 1732401 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643460387 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002357414 |
Protein GI | 217972663 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0253949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.427643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAACG TTTTAATTAC AGGTGCTACT GGCTTTGTTG GTTCAGTCTT AACTGCTGAG CTAAAAAAAT GTTCTAACGT GAAAGTTATT TCTGTCGTTA GGAAGTTAAG CACATTTATC GATGACGATA CTATTGTAGT TGGTGATATC GATGGGTCTA CTGATTACTC TGCCGCAATT AACGGCGTTG ATATTGTTAT TCATTGCGCT GCTCGTGCCC ATATTATGAG GGATGAGTCT ACAGAGCCAT TAGTTGAATA TCGTAAAGTT AATTTGGAAG CCACTTTAAA CCTTGCGAAG CAAGCGATAA AAGCTGGTGT TAAACGTTTT GTTTTTGTCA GTAGTATCAA GGTAAACGGC GAACGTTCAC CGCTTGGTAA GCCTTTTAAA CACGGCGATA TTTCTAATCC GCTTGATGAT TATGGTGTTT CAAAATCTGA AGCAGAGCTT CAACTTATTG AGCTATCAAA TGCGACAGGG TTAGAAGTGG TTGTTATTCG TCCAACTTTA GTTTATGGAC CTGGTGTAAA GGCGAATTTC GGTGCACTGA TGAATTTAGT TGCAAAAGGA ATACCGTTGC CTTTTGGCTA TATTAACCAA AATAAACGTA GCCTTGTCTC AGTAGTCAAT CTTGTTGATT TAATCATCAC CTGTATTGAT CATCCTAAAG CGGCTAATCA AGTATTCCTT GTTTCAGATG ATTATGATGT TTCGACCTCT GAAATGGTTC GTGAAATGGC AAAGGCACTA GAAAAACCTT CATGGCAACT CCCTATACCC ATTTGGTGTT ATAAGTTAGC GGGTAAACTA TTTAAAAAAT CAGATGTTGT CGATCGGTTA ACAGGTTCAT TACAGGTCGA TATTTTTCAT ACGAAAGAAA CCTTAGGTTG GAAGCCACCT CAGACCCTGC AAGATGGGTT CAAACAAACA GCGCAAGCTT TTCTTCAAGC AAAAACTAAA TGA
|
Protein sequence | MNNVLITGAT GFVGSVLTAE LKKCSNVKVI SVVRKLSTFI DDDTIVVGDI DGSTDYSAAI NGVDIVIHCA ARAHIMRDES TEPLVEYRKV NLEATLNLAK QAIKAGVKRF VFVSSIKVNG ERSPLGKPFK HGDISNPLDD YGVSKSEAEL QLIELSNATG LEVVVIRPTL VYGPGVKANF GALMNLVAKG IPLPFGYINQ NKRSLVSVVN LVDLIITCID HPKAANQVFL VSDDYDVSTS EMVREMAKAL EKPSWQLPIP IWCYKLAGKL FKKSDVVDRL TGSLQVDIFH TKETLGWKPP QTLQDGFKQT AQAFLQAKTK
|
| |