Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1469 |
Symbol | |
ID | 7087522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1713103 |
End bp | 1713609 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643460372 |
Product | transcriptional acivator RfaH |
Protein accession | YP_002357399 |
Protein GI | 217972648 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000410204 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAT GGTACCTTTT GTATTGTAAG CCTCGTAGTG AAGCGAGAGC GCAACAAAAC TTAGCACTTC AAAATTTAGA GACGTATTTA CCTATGGTCT CTGAAGAGAA ATCTCAACGC GGGCGGAAAC AGGTCTGTCG TGTACCACTA TTCCCTAATT ATTTATTCAT CAATTTCGAC CCAAGCCAAA CAAGCGTTAG GCAGGTCCAC TCTACTCGTG GTGTGAATCG AATCGTTAAT TGTCAAGAAA AAATGACGCC CATTGACGAC AGAATTATCC ATACCATTCG CATGAAAGAA TTAACGCCTT CCCAAACGGT ATTAGCTGAA GCATTAGAGC TAAAAACTGG GGAAAAAATT CGTTTTACAG ATGGACCGTT TGTTGATCTC GAAGGTATTT TTCAAGAAAA ATGCCCAAAT AAGCGTTGCC ATGTTCTTTT TAACATTATG GGGCAGATAA AGACGGTTAC GGTACCACAG CAAAGTGTGG AACGAATTTG TGTTTAA
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Protein sequence | MKAWYLLYCK PRSEARAQQN LALQNLETYL PMVSEEKSQR GRKQVCRVPL FPNYLFINFD PSQTSVRQVH STRGVNRIVN CQEKMTPIDD RIIHTIRMKE LTPSQTVLAE ALELKTGEKI RFTDGPFVDL EGIFQEKCPN KRCHVLFNIM GQIKTVTVPQ QSVERICV
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