| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1468 |
|---|
| Symbol | |
|---|
| ID | 7087521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1711122 |
|---|
| End bp | 1712627 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643460371 |
|---|
| Product | amino acid/peptide transporter |
|---|
| Protein accession | YP_002357398 |
|---|
| Protein GI | 217972647 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3104] Dipeptide/tripeptide permease |
|---|
| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00129299 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAG CAAAACCACA AGGAACGATG CTTGGGCATC CTAAGGGATT GTTCCTGCTG
TTTACAACAG AACTTTGGGA ACGTTTTAGT TATTATGCAA TGCGCGCCAT TTTGGTACTT
TATCTAGTCG ATAAAGTGCA GAGTGATGGC GGGCATGGTC TAGGTTGGAC TCAAGCTGAA
GCATTATCGC TTTATGGTAC TTTCACAGGG TTAGTCTACT TAACGCCACT TATCGGTGGC
TGGTTAGCTG ATAACGTACT GGGTCAACGT AAAGCCATTT ATTTTGGTGG CGCATTAATG
GCTGCGGGTC AATTCTTACT TGCCGCGCCG CACAGTTGGA TCCCAGGTTT AGAAACAACT
GTGTTCTATA TTGGTTTGGG TACTCTCATT CTGGGTAACG GTTTATTCAA GCCAAACATA
TCCACTATGG TGGGTGATCT TTACGAAGAA GGCGATCACC GTCGTGATGG CGCATTTACC
ATTTTCTACA TGGGCATCAA CTTAGGTGCT GCCCTGTCAG GCTTTATAGT CGCCTGGGCT
TATACTAGCT TCGGACACGC TACTATCGTT GACGGACAAG AAGTGTTTGT TAACAACTGG
CAAGCAGGTT TCTTCTGTGC CGGTGTTGGT ATGATTTTCT CTTTAATCAT CCAATTTTTG
TTCGCACAGA AGTATTTAGG CGATATCGGC AGAGTGCCAG CCGCTAAGCT TGAAAAGCAA
AAAGCGGAAG AGAAAGGTGA AGTACGTAAA GAACCTCTGA CCAAAGTTGA ACGTGACCGT
ATTAAAGTCA TCATGGTAAT GGGTTTGTTC ACAATTATAT TCTGGGCTGG TTTCGAACAA
GCTGGCGGTT TAATGAACTT GTTCACTAAC GAGTTCACCG ATCGCATGGT CGGTAGCTTT
GAAGTCCCAA CAACATGGTT CCAATCATTA AACGCTATCT TTATCGTATT ATTTGCACCT
GTGATTGCTT CTATCTGGAT CCGTTTAGGT AAGAATGAAC CTAACTCTCC AGTTAAATTT
GCGCTTGGTC TGTTCTTACT CGCGATCGGT TTCCTATTCA TGATAGGTGC TGTAATGCAA
ATGGGCGGTG ATGCATCGGT TAAATCGAGC ATGTGGTGGT TAGTGGGCGC TTATTTCTTC
CACACTATGG GTGAGCTTTG CTTATCACCT ATCGGTTTAT CTATGGTGAC TAAGTTAGCA
CCTCTGCGTA TCGCATCTTT GATGATGGGA GCTTGGTTCC TATTCGTTGC TGCCGCCAAC
AAAATTGGCG GTGTGGTTGG CTCATTCATC GGCCATGGCG GTGCAAAAGA AGAACAACTG
GCAAATGCAA TGGCGATCTT CTCTGGCATT GCCATCACAG CAGCTCTTTC AGGCATTATT
CTGTATTTTA TGGCTGATAA ATTAGTGGAC TGGATGCATG GCGCTGAAAG CAAACATCAG
ACTGAAGCTG AAATATTAGA AAGTGAAATT GCTGTAACTG CTGAGCATGA AGCAATAAAA
CGCTAA
|
|---|
| Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDKVQSDG GHGLGWTQAE
ALSLYGTFTG LVYLTPLIGG WLADNVLGQR KAIYFGGALM AAGQFLLAAP HSWIPGLETT
VFYIGLGTLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINLGA ALSGFIVAWA
YTSFGHATIV DGQEVFVNNW QAGFFCAGVG MIFSLIIQFL FAQKYLGDIG RVPAAKLEKQ
KAEEKGEVRK EPLTKVERDR IKVIMVMGLF TIIFWAGFEQ AGGLMNLFTN EFTDRMVGSF
EVPTTWFQSL NAIFIVLFAP VIASIWIRLG KNEPNSPVKF ALGLFLLAIG FLFMIGAVMQ
MGGDASVKSS MWWLVGAYFF HTMGELCLSP IGLSMVTKLA PLRIASLMMG AWFLFVAAAN
KIGGVVGSFI GHGGAKEEQL ANAMAIFSGI AITAALSGII LYFMADKLVD WMHGAESKHQ
TEAEILESEI AVTAEHEAIK R
|
|---|
| |