| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1454 |
|---|
| Symbol | fliA |
|---|
| ID | 7087507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1697011 |
|---|
| End bp | 1697724 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643460357 |
|---|
| Product | flagellar biosynthesis sigma factor |
|---|
| Protein accession | YP_002357384 |
|---|
| Protein GI | 217972633 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.375178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAG CCGCTGCGTA TACTTGTTTA GACAATAAAT CGTCGATCGT TGAACAGTAT
GCTCCGTTGG TTAAAAGAAT TGCGCATCAT TTACTCGCCA GACTACCTGC CTCAGTGCAG
TTAGATGATT TACTCCAAGC TGGGATGATG GGGTTATTAG AAGCATCATC CAAGTTTGAT
GGTGGCAAGG GTGCGAAATT TGAAACCTTC GCCGGCATAC GCATACGTGG GGCCATGTTA
GATGAAATTC GCCGCGGCGA TTGGGTCCCT CGTTCCGTTC ATCGTAACAA CCGCAAGGTT
GCACACGCTA TAGATGAGTT AGAGCAAGCG CTGGGTCGTG ATGCACGCGA CACAGAAATT
GCAGAAAAAC TTGATATGAC GCTCGATGAG TACCATCATA TTCTTAACGA TGTTTCTGTC
GGAAAAATCA TAGGGATAGA AGACTTAGGC GTATCTCAGG ATATACTTAC AGTGAGTGAT
CGGTCCGATG ATGATTCATT TGAAGCCTTA GCTGAGAACC AATTTCATTC TGCGCTGGTT
GAGGCAATTA AATTATTGCC TGAAAGAGAT GCATTAGTGT TATCCCTGTA CTACGATGAA
GCATTGAATT TAAAAGAGAT TGGCGCCATT CTTGAAGTTA GTGAATCGCG GGTTAGCCAG
ATATTAAGTC AGGCAATGTT GCGATTGAAA GCTAAACTCA AGCACTGGAC ATAA
|
|---|
| Protein sequence | MNKAAAYTCL DNKSSIVEQY APLVKRIAHH LLARLPASVQ LDDLLQAGMM GLLEASSKFD
GGKGAKFETF AGIRIRGAML DEIRRGDWVP RSVHRNNRKV AHAIDELEQA LGRDARDTEI
AEKLDMTLDE YHHILNDVSV GKIIGIEDLG VSQDILTVSD RSDDDSFEAL AENQFHSALV
EAIKLLPERD ALVLSLYYDE ALNLKEIGAI LEVSESRVSQ ILSQAMLRLK AKLKHWT
|
|---|
| |